Literature DB >> 1390781

Inactivation of a beta-glucosidase through the accumulation of a stable 2-deoxy-2-fluoro-alpha-D-glucopyranosyl-enzyme intermediate: a detailed investigation.

I P Street1, J B Kempton, S G Withers.   

Abstract

The inactivation of glycosidases by 2-deoxy-2-fluoroglycosides has been shown previously to occur via the accumulation of a covalent 2-deoxy-2-fluoro-alpha-D-glucopyranosyl enzyme intermediate [Withers, S. G., & Street, I. P. (1988) J. Am. Chem. Soc. 110, 8551]. Further characterization of this process with Agrobacterium beta-glucosidase is described, and the range of glycosides engaging in this behavior is examined. Inactivation is shown to be accompanied by the release of a stoichiometric "burst" of aglycon, thereby providing a new class of active site titration agents for glycosidases. The rate of inactivation is shown to be very strongly dependent on the leaving group ability of the aglycon, the slowest inactivator studied (p-nitrophenyl2-deoxy-2-fluoro-beta-D-glucopyranoside) yielding only partial inactivation due to turnover of the intermediate becoming competitive with its formation. Such turnover of the intermediate is shown to be greatly accelerated by transglycosylation to a suitable glycoside bound in the aglycon site, resulting in the release of a disaccharide product which was isolated and characterized. The pH dependences of both the formation and the hydrolysis of the 2-deoxy-2-fluoroglycosyl-enzyme closely resemble those of each step for normal catalysis, indicating that the same catalytic groups are involved in both processes. A model system for the partial "steady-state" inactivation observed previously [Withers, S. G., Rupitz, K., & Street, I. P. (1988) J. Biol. Chem. 263, 7929] with certain other glycosidases was established by incubating the enzyme with an inactivator known to undergo relatively rapid transglycosylation in the presence of various concentrations of a suitable reactivator.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1992        PMID: 1390781     DOI: 10.1021/bi00156a016

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  26 in total

1.  Long-lived glycosyl-enzyme intermediate mimic produced by formate re-activation of a mutant endoglucanase lacking its catalytic nucleophile.

Authors:  J L Viladot; F Canals; X Batllori; A Planas
Journal:  Biochem J       Date:  2001-04-01       Impact factor: 3.857

2.  Imaging of enzyme replacement therapy using PET.

Authors:  Christopher P Phenix; Brian P Rempel; Karen Colobong; Doris J Doudet; Michael J Adam; Lorne A Clarke; Stephen G Withers
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

3.  Participation of asparagine 370 and glutamine 235 in the catalysis by acid beta-glucosidase: the enzyme deficient in Gaucher disease.

Authors:  Benjamin Liou; Gregory A Grabowski
Journal:  Mol Genet Metab       Date:  2009-02-13       Impact factor: 4.797

4.  Mechanistic consequences of replacing the active-site nucleophile Glu-358 in Agrobacterium sp. beta-glucosidase with a cysteine residue.

Authors:  S L Lawson; R A Warren; S G Withers
Journal:  Biochem J       Date:  1998-02-15       Impact factor: 3.857

5.  Proteolytic Cleavage Driven by Glycosylation.

Authors:  Miriam P Kötzler; Stephen G Withers
Journal:  J Biol Chem       Date:  2015-10-29       Impact factor: 5.157

6.  Replacement of the catalytic nucleophile aspartyl residue of dextran glucosidase by cysteine sulfinate enhances transglycosylation activity.

Authors:  Wataru Saburi; Momoko Kobayashi; Haruhide Mori; Masayuki Okuyama; Atsuo Kimura
Journal:  J Biol Chem       Date:  2013-09-19       Impact factor: 5.157

Review 7.  Structure-function relationships of beta-D-glucan endo- and exohydrolases from higher plants.

Authors:  M Hrmova; G B Fincher
Journal:  Plant Mol Biol       Date:  2001-09       Impact factor: 4.076

8.  Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.

Authors:  Jian Yang; Yuqun Xu; Takuya Miyakawa; Lijuan Long; Masaru Tanokura
Journal:  Appl Environ Microbiol       Date:  2020-11-10       Impact factor: 4.792

9.  The effect of a covalent and a noncovalent small-molecule inhibitor on the structure of Abg β-glucosidase in the gas-phase.

Authors:  Khadijeh Rajabi; D J Douglas
Journal:  J Am Soc Mass Spectrom       Date:  2013-04-18       Impact factor: 3.109

10.  Identification of Glu-120 as the catalytic nucleophile in Streptomyces lividans endoglucanase celB.

Authors:  D L Zechel; S He; C Dupont; S G Withers
Journal:  Biochem J       Date:  1998-11-15       Impact factor: 3.857

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