Literature DB >> 1377819

Novel mutants of 23S RNA: characterization of functional properties.

U Saarma1, J Remme.   

Abstract

Single point mutations corresponding to the positions G2505 and G2583 have been constructed in the gene encoding E.coli 23S rRNA. These mutations were linked to the second mutation A1067 to T, known to confer resistance to thiostrepton (1). Mutant ribosomes were analyzed in vitro for their ability to direct poly(U) dependent translation, their missence error frequency and in addition their sensitivity to peptidyltransferase inhibitors. It was evident that the mutated ribosomes had an altered dependence on [Mg2+] and an increased sensitivity to chloramphenicol during poly(U) directed poly(Phe) synthesis. In a transpeptidation assay mutated ribosomes were as sensitive to chloramphenicol as wild-type ribosomes. However, the mutant ribosomes exhibited an increased sensitivity to lincomycin. An increase in translational accuracy was attributed to the mutations at the position 2583: accuracy increased in the order G less than A less than U less than C.

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Year:  1992        PMID: 1377819      PMCID: PMC312451          DOI: 10.1093/nar/20.12.3147

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  16 in total

1.  Selective isolation and detailed analysis of intra-RNA cross-links induced in the large ribosomal subunit of E. coli: a model for the tertiary structure of the tRNA binding domain in 23S RNA.

Authors:  P Mitchell; M Osswald; D Schueler; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1990-08-11       Impact factor: 16.971

2.  Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites.

Authors:  D Moazed; H F Noller
Journal:  Cell       Date:  1989-05-19       Impact factor: 41.582

3.  A plasmid-coded and site-directed mutation in Escherichia coli 23S RNA that confers resistance to erythromycin: implications for the mechanism of action of erythromycin.

Authors:  B Vester; R A Garrett
Journal:  Biochimie       Date:  1987-08       Impact factor: 4.079

4.  Ribosomal translocation assayed by the matrix-bound poly(uridylic acid) column technique.

Authors:  N V Belitsina; A S Spirin
Journal:  Eur J Biochem       Date:  1979-02-15

5.  Mechanism of codon-anticodon interaction in ribosomes: codon-anticodon interaction of aminoacyl-tRNA at the ribosomal donor site.

Authors:  S V Kirillov; K S Kemkhadze; E M Makarov; V I Makhno; V B Odintsov; Y P Semenkov
Journal:  FEBS Lett       Date:  1980-11-03       Impact factor: 4.124

6.  Partial release of AcPhe-Phe-tRNA from ribosomes during poly(U)-dependent poly(Phe) synthesis and the effects of chloramphenicol.

Authors:  H J Rheinberger; K H Nierhaus
Journal:  Eur J Biochem       Date:  1990-11-13

7.  Identification of a rRNA/chloramphenicol interaction site within the peptidyltransferase center of the 50 S subunit of the Escherichia coli ribosome.

Authors:  R T Marconi; J S Lodmell; W E Hill
Journal:  J Biol Chem       Date:  1990-05-15       Impact factor: 5.157

8.  Sites of interaction of the CCA end of peptidyl-tRNA with 23S rRNA.

Authors:  D Moazed; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

9.  Photo-affinity labelling at the peptidyl transferase centre reveals two different positions for the A- and P-sites in domain V of 23S rRNA.

Authors:  G Steiner; E Kuechler; A Barta
Journal:  EMBO J       Date:  1988-12-01       Impact factor: 11.598

10.  The importance of highly conserved nucleotides in the binding region of chloramphenicol at the peptidyl transfer centre of Escherichia coli 23S ribosomal RNA.

Authors:  B Vester; R A Garrett
Journal:  EMBO J       Date:  1988-11       Impact factor: 11.598

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  10 in total

1.  Simulating movement of tRNA into the ribosome during decoding.

Authors:  Kevin Y Sanbonmatsu; Simpson Joseph; Chang-Shung Tung
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-25       Impact factor: 11.205

2.  A functional peptide encoded in the Escherichia coli 23S rRNA.

Authors:  T Tenson; A DeBlasio; A Mankin
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-28       Impact factor: 11.205

Review 3.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

Review 4.  Throwing a spanner in the works: antibiotics and the translation apparatus.

Authors:  C M Spahn; C D Prescott
Journal:  J Mol Med (Berl)       Date:  1996-08       Impact factor: 4.599

5.  Mutational analysis of the donor substrate binding site of the ribosomal peptidyltransferase center.

Authors:  U Saarma; C M Spahn; K H Nierhaus; J Remme
Journal:  RNA       Date:  1998-02       Impact factor: 4.942

6.  Mutations at U2555, a tRNA-protected base in 23S rRNA, affect translational fidelity.

Authors:  M O'Connor; A E Dahlberg
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-01       Impact factor: 11.205

7.  Effect of polyamines on the inhibition of peptidyltransferase by antibiotics: revisiting the mechanism of chloramphenicol action.

Authors:  Maria A Xaplanteri; Athanasios Andreou; George P Dinos; Dimitrios L Kalpaxis
Journal:  Nucleic Acids Res       Date:  2003-09-01       Impact factor: 16.971

8.  Mutations in the peptidyl transferase region of E. coli 23S rRNA affecting translational accuracy.

Authors:  S T Gregory; K R Lieberman; A E Dahlberg
Journal:  Nucleic Acids Res       Date:  1994-02-11       Impact factor: 16.971

9.  Analysis of the function of E. coli 23S rRNA helix-loop 69 by mutagenesis.

Authors:  Aivar Liiv; Diana Karitkina; Ulo Maiväli; Jaanus Remme
Journal:  BMC Mol Biol       Date:  2005-07-29       Impact factor: 2.946

10.  Mutation of a highly conserved base in the yeast mitochondrial 21S rRNA restricts ribosomal frameshifting.

Authors:  B Weiss-Brummer; A Zollner; A Haid; S Thompson
Journal:  Mol Gen Genet       Date:  1995-07-28
  10 in total

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