Literature DB >> 1376111

Molecular biology of the 2-haloacid halidohydrolase IVa from Pseudomonas cepacia MBA4.

U Murdiyatmo1, W Asmara, J S Tsang, A J Baines, A T Bull, D J Hardman.   

Abstract

The structural gene (hdl IVa) for the Pseudomonas cepacia MBA4 2-haloacid halidohydrolase IVa (Hdl IVa) was isolated on a 1.6 kb fragment of Ps. cepacia MBA4 chromosomal DNA. The recombinant halidohydrolase was expressed in Escherichia coli and Pseudomonas putida and the structural gene was subcloned on to the tac expression vector pBTac1. High-level expression from the tac promoter was seen to be temperature-dependent, a consequence of the nucleotide sequence adjacent to the fragment encoding the halidohydrolase. The nucleotide sequence of the fragment encoding the Hdl IVa was determined and analysed. Three ATG codons were identified in one of the open reading frames and the one corresponding to the start of the hdl IVa structural gene was determined by comparison of the predicted amino acid sequences with the experimentally determined N-terminal sequences of halidohydrolase IVa. The hdl IVa gene encoded a 231-amino acid-residue protein of M(r) 25,900. The sequence and predicted structural data are discussed and comparison is made with sequence data for other halidohydrolases.

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Year:  1992        PMID: 1376111      PMCID: PMC1132701          DOI: 10.1042/bj2840087

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  28 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1969-04       Impact factor: 11.205

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Journal:  Eur J Biochem       Date:  1971-07-15

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Authors:  D S Holmes; M Quigley
Journal:  Anal Biochem       Date:  1981-06       Impact factor: 3.365

4.  Purification and characterization of hydrolytic haloalkane dehalogenase from Xanthobacter autotrophicus GJ10.

Authors:  S Keuning; D B Janssen; B Witholt
Journal:  J Bacteriol       Date:  1985-08       Impact factor: 3.490

5.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

6.  Characterization and nucleotide sequence determination of a repeat element isolated from a 2,4,5-T degrading strain of Pseudomonas cepacia.

Authors:  P H Tomasek; B Frantz; U M Sangodkar; R A Haugland; A M Chakrabarty
Journal:  Gene       Date:  1989       Impact factor: 3.688

7.  Rapid and sensitive colorimetric method for visualizing biotin-labeled DNA probes hybridized to DNA or RNA immobilized on nitrocellulose: Bio-blots.

Authors:  J J Leary; D J Brigati; D C Ward
Journal:  Proc Natl Acad Sci U S A       Date:  1983-07       Impact factor: 11.205

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  Comparative studies of the amino acid and nucleotide sequences of pilin derived from Pseudomonas aeruginosa PAK and PAO.

Authors:  P A Sastry; B B Finlay; B L Pasloske; W Paranchych; J R Pearlstone; L B Smillie
Journal:  J Bacteriol       Date:  1985-11       Impact factor: 3.490

10.  Complete nucleotide sequences and comparison of the structural genes of two 2-haloalkanoic acid dehalogenases from Pseudomonas sp. strain CBS3.

Authors:  B Schneider; R Müller; R Frank; F Lingens
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

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  15 in total

1.  Bacterial DL-2-haloacid dehalogenase from Pseudomonas sp. strain 113: gene cloning and structural comparison with D- and L-2-haloacid dehalogenases.

Authors:  V Nardi-Dei; T Kurihara; C Park; N Esaki; K Soda
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

2.  Cloning and characterization of a cryptic haloacid dehalogenase from Burkholderia cepacia MBA4.

Authors:  J S Tsang; L Sam
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

3.  Investigation of two evolutionarily unrelated halocarboxylic acid dehalogenase gene families.

Authors:  K E Hill; J R Marchesi; A J Weightman
Journal:  J Bacteriol       Date:  1999-04       Impact factor: 3.490

4.  The hdhA gene encodes a haloacid dehalogenase that is regulated by the LysR-type regulator, HdhR, in Sinorhizobium meliloti.

Authors:  Ratiboot Sallabhan; Jarunee Kerdwong; James M Dubbs; Kumpanart Somsongkul; Wirongrong Whangsuk; Phairin Piewtongon; Skorn Mongkolsuk; Suvit Loprasert
Journal:  Mol Biotechnol       Date:  2013-06       Impact factor: 2.695

5.  Protein engineering of the 2-haloacid halidohydrolase IVa from Pseudomonas cepacia MBA4.

Authors:  W Asmara; U Murdiyatmo; A J Baines; A T Bull; D J Hardman
Journal:  Biochem J       Date:  1993-05-15       Impact factor: 3.857

6.  The nucleotide sequence of a transposable haloalkanoic acid dehalogenase regulatory gene (dehRI) from Pseudomonas putida strain PP3 and its relationship with sigma 54-dependent activators.

Authors:  A W Topping; A W Thomas; J H Slater; A J Weightman
Journal:  Biodegradation       Date:  1995-09       Impact factor: 3.909

Review 7.  Bacterial dehalogenases: biochemistry, genetics, and biotechnological applications.

Authors:  S Fetzner; F Lingens
Journal:  Microbiol Rev       Date:  1994-12

8.  Comparative studies of genes encoding thermostable L-2-halo acid dehalogenase from Pseudomonas sp. strain YL, other dehalogenases, and two related hypothetical proteins from Escherichia coli.

Authors:  V Nardi-Dei; T Kurihara; T Okamura; J Q Liu; H Koshikawa; H Ozaki; Y Terashima; N Esaki; K Soda
Journal:  Appl Environ Microbiol       Date:  1994-09       Impact factor: 4.792

Review 9.  Genetics and biochemistry of 1,2-dichloroethane degradation.

Authors:  D B Janssen; J R van der Ploeg; F Pries
Journal:  Biodegradation       Date:  1994-12       Impact factor: 3.909

10.  Purification, crystallization and preliminary crystallographic analysis of DehIVa, a dehalogenase from Burkholderia cepacia MBA4.

Authors:  Jason W Schmidberger; Aaron J Oakley; Jimmy S H Tsang; Matthew C J Wilce
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-02-08
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