Literature DB >> 13678418

Reaction mechanism of chitobiose phosphorylase from Vibrio proteolyticus: identification of family 36 glycosyltransferase in Vibrio.

Yuji Honda1, Motomitsu Kitaoka, Kiyoshi Hayashi.   

Abstract

A family 36 glycosyltransferase gene was cloned from Vibrio proteolyticus. The deduced amino acid sequence showed a high degree of identity with ChBP (chitobiose phosphorylase) from another species, Vibrio furnissii. The recombinant enzyme catalysed the reversible phosphorolysis of (GlcNAc)2 (chitobiose) to form 2-acetamide-2-deoxy-alpha-D-glucose 1-phosphate [GlcNAc-1-P] and GlcNAc, but showed no activity on cellobiose, indicating that the enzyme was ChBP, not cellobiose phosphorylase. In the synthetic reaction, the ChBP was active with alpha-D-glucose 1-phosphate as the donor substrate as well as GlcNAc-1-P to produce beta-D-glucosyl-(1-->4)-2-acetamide-2-deoxy-D-glucose with GlcNAc as the acceptor substrate. The enzyme allowed aryl-beta-glycosides of GlcNAc as the acceptor substrate with 10-20% activities of GlcNAc. Kinetic parameters of (GlcNAc)2 in the phosphorolysis and GlcNAc-1-P in the synthetic reaction were determined as follows: phosphorolysis, k(0)=5.5 s(-1), K(m)=2.0 mM; synthetic reaction, k(0)=10 s(-1), K(m)=14 mM, respectively. The mechanism of the phosphorolytic reaction followed a sequential Bi Bi mechanism, as frequently observed with cellobiose phosphorylases. Substrate inhibition by GlcNAc was observed in the synthetic reaction. The enzyme was considered a unique biocatalyst for glycosidation.

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Year:  2004        PMID: 13678418      PMCID: PMC1223840          DOI: 10.1042/BJ20031171

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  21 in total

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2.  Purification and properties of a cellobiose phosphorylase (CepA) and a cellodextrin phosphorylase (CepB) from the cellulolytic thermophile Clostridium stercorarium.

Authors:  M Reichenbecher; F Lottspeich; K Bronnenmeier
Journal:  Eur J Biochem       Date:  1997-07-01

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Authors:  J K Alexander
Journal:  J Biol Chem       Date:  1968-06-10       Impact factor: 5.157

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

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Authors:  Y G Liu; N Mitsukawa; T Oosumi; R F Whittier
Journal:  Plant J       Date:  1995-09       Impact factor: 6.417

6.  Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking.

Authors:  Y G Liu; R F Whittier
Journal:  Genomics       Date:  1995-02-10       Impact factor: 5.736

7.  Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima.

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Journal:  Nature       Date:  1999-05-27       Impact factor: 49.962

8.  Purification and properties of laminaribiose phosphorylase (EC 2.4 1.31) from Euglena gracilis Z.

Authors:  M Kitaoka; T Sasaki; H Taniguchi
Journal:  Arch Biochem Biophys       Date:  1993-08-01       Impact factor: 4.013

9.  Purification and properties of Cellvibrio gilvus cellobiose phosphorylase.

Authors:  T Sasaki; T Tanaka; S Nakagawa; K Kainuma
Journal:  Biochem J       Date:  1983-03-01       Impact factor: 3.857

10.  How to measure and predict the molar absorption coefficient of a protein.

Authors:  C N Pace; F Vajdos; L Fee; G Grimsley; T Gray
Journal:  Protein Sci       Date:  1995-11       Impact factor: 6.725

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Journal:  J Biol Chem       Date:  2012-03-26       Impact factor: 5.157

2.  Crystallization and X-ray diffraction studies of cellobiose phosphorylase from Cellulomonas uda.

Authors:  Annelies Van Hoorebeke; Jan Stout; John Kyndt; Manu De Groeve; Ina Dix; Tom Desmet; Wim Soetaert; Jozef Van Beeumen; Savvas N Savvides
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-27

3.  Crystallization and X-ray diffraction studies of inverting trehalose phosphorylase from Thermoanaerobacter sp.

Authors:  Annelies Van Hoorebeke; Jan Stout; Ruben Van der Meeren; John Kyndt; Jozef Van Beeumen; Savvas N Savvides
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-03-31

4.  Structural dissection of the reaction mechanism of cellobiose phosphorylase.

Authors:  Masafumi Hidaka; Motomitsu Kitaoka; Kiyoshi Hayashi; Takayoshi Wakagi; Hirofumi Shoun; Shinya Fushinobu
Journal:  Biochem J       Date:  2006-08-15       Impact factor: 3.857

5.  Characterization of three beta-galactoside phosphorylases from Clostridium phytofermentans: discovery of d-galactosyl-beta1->4-l-rhamnose phosphorylase.

Authors:  Masahiro Nakajima; Mamoru Nishimoto; Motomitsu Kitaoka
Journal:  J Biol Chem       Date:  2009-06-02       Impact factor: 5.157

6.  Identification of lacto-N-Biose I phosphorylase from Vibrio vulnificus CMCP6.

Authors:  Masahiro Nakajima; Motomitsu Kitaoka
Journal:  Appl Environ Microbiol       Date:  2008-08-22       Impact factor: 4.792

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Journal:  Sci Rep       Date:  2017-02-15       Impact factor: 4.379

8.  2-O-α-D-glucosylglycerol phosphorylase from Bacillus selenitireducens MLS10 possessing hydrolytic activity on β-D-glucose 1-phosphate.

Authors:  Takanori Nihira; Yuka Saito; Ken'ichi Ohtsubo; Hiroyuki Nakai; Motomitsu Kitaoka
Journal:  PLoS One       Date:  2014-01-22       Impact factor: 3.240

Review 9.  Discovery and Biotechnological Exploitation of Glycoside-Phosphorylases.

Authors:  Ao Li; Mounir Benkoulouche; Simon Ladeveze; Julien Durand; Gianluca Cioci; Elisabeth Laville; Gabrielle Potocki-Veronese
Journal:  Int J Mol Sci       Date:  2022-03-11       Impact factor: 5.923

  9 in total

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