Literature DB >> 22451675

1,3-1,4-α-L-fucosynthase that specifically introduces Lewis a/x antigens into type-1/2 chains.

Haruko Sakurama1, Shinya Fushinobu, Masafumi Hidaka, Erina Yoshida, Yuji Honda, Hisashi Ashida, Motomitsu Kitaoka, Hidehiko Kumagai, Kenji Yamamoto, Takane Katayama.   

Abstract

α-L-fucosyl residues attached at the non-reducing ends of glycoconjugates constitute histo-blood group antigens Lewis (Le) and ABO and play fundamental roles in various biological processes. Therefore, establishing a method for synthesizing the antigens is important for functional glycomics studies. However, regiospecific synthesis of glycosyl linkages, especially α-L-fucosyl linkages, is quite difficult to control both by chemists and enzymologists. Here, we generated an α-L-fucosynthase that specifically introduces Le(a) and Le(x) antigens into the type-1 and type-2 chains, respectively; i.e. the enzyme specifically accepts the disaccharide structures (Galβ1-3/4GlcNAc) at the non-reducing ends and attaches a Fuc residue via an α-(1,4/3)-linkage to the GlcNAc. X-ray crystallographic studies revealed the structural basis of this strict regio- and acceptor specificity, which includes the induced fit movement of the catalytically important residues, and the difference between the active site structures of 1,3-1,4-α-L-fucosidase (EC 3.2.1.111) and α-L-fucosidase (EC 3.2.1.51) in glycoside hydrolase family 29. The glycosynthase developed in this study should serve as a potentially powerful tool to specifically introduce the Le(a/x) epitopes onto labile glycoconjugates including glycoproteins. Mining glycosidases with strict specificity may represent the most efficient route to the specific synthesis of glycosidic bonds.

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Year:  2012        PMID: 22451675      PMCID: PMC3351332          DOI: 10.1074/jbc.M111.333781

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  51 in total

1.  Molecular cloning and characterization of Bifidobacterium bifidum 1,2-alpha-L-fucosidase (AfcA), a novel inverting glycosidase (glycoside hydrolase family 95).

Authors:  Takane Katayama; Akiko Sakuma; Takatoshi Kimura; Yutaka Makimura; Jun Hiratake; Kanzo Sakata; Takashi Yamanoi; Hidehiko Kumagai; Kenji Yamamoto
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

2.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

3.  Identification of the catalytic nucleophile of the family 29 alpha-L-fucosidase from Thermotoga maritima through trapping of a covalent glycosyl-enzyme intermediate and mutagenesis.

Authors:  Chris A Tarling; Shouming He; Gerlind Sulzenbacher; Christophe Bignon; Yves Bourne; Bernard Henrissat; Stephen G Withers
Journal:  J Biol Chem       Date:  2003-09-15       Impact factor: 5.157

4.  Enzymatic synthesis of alpha-L-fucosyl-N-acetyllactosamines and 3'-O-alpha-L-fucosyllactose utilizing alpha-L-fucosidases.

Authors:  T Murata; S Morimoto; X Zeng; S Watanabe; T Usui
Journal:  Carbohydr Res       Date:  1999-08-15       Impact factor: 2.104

5.  SWEET - WWW-based rapid 3D construction of oligo- and polysaccharides.

Authors:  A Bohne; E Lang; C W von der Lieth
Journal:  Bioinformatics       Date:  1999-09       Impact factor: 6.937

6.  Enzymatic synthesis of fucose-containing disaccharides employing the partially purified alpha-L-fucosidase from Penicillium multicolor.

Authors:  E Farkas; J Thiem; K Ajisaka
Journal:  Carbohydr Res       Date:  2000-09-22       Impact factor: 2.104

7.  Reaction mechanism of chitobiose phosphorylase from Vibrio proteolyticus: identification of family 36 glycosyltransferase in Vibrio.

Authors:  Yuji Honda; Motomitsu Kitaoka; Kiyoshi Hayashi
Journal:  Biochem J       Date:  2004-01-01       Impact factor: 3.857

8.  Crystal structure of Thermotoga maritima alpha-L-fucosidase. Insights into the catalytic mechanism and the molecular basis for fucosidosis.

Authors:  Gerlind Sulzenbacher; Christophe Bignon; Takeshi Nishimura; Chris A Tarling; Stephen G Withers; Bernard Henrissat; Yves Bourne
Journal:  J Biol Chem       Date:  2004-01-08       Impact factor: 5.157

Review 9.  Fucose: biosynthesis and biological function in mammals.

Authors:  Daniel J Becker; John B Lowe
Journal:  Glycobiology       Date:  2003-03-19       Impact factor: 4.313

10.  Helicobacter pylori modulates the T helper cell 1/T helper cell 2 balance through phase-variable interaction between lipopolysaccharide and DC-SIGN.

Authors:  Mathijs P Bergman; Anneke Engering; Hermelijn H Smits; Sandra J van Vliet; Ad A van Bodegraven; Hans-Peter Wirth; Martien L Kapsenberg; Christina M J E Vandenbroucke-Grauls; Yvette van Kooyk; Ben J Appelmelk
Journal:  J Exp Med       Date:  2004-10-18       Impact factor: 14.307

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  26 in total

Review 1.  α-L-Fucosidases and their applications for the production of fucosylated human milk oligosaccharides.

Authors:  Li Wan; Yingying Zhu; Wenli Zhang; Wanmeng Mu
Journal:  Appl Microbiol Biotechnol       Date:  2020-05-01       Impact factor: 4.813

Review 2.  Oligosaccharide Synthesis and Translational Innovation.

Authors:  Larissa Krasnova; Chi-Huey Wong
Journal:  J Am Chem Soc       Date:  2019-02-18       Impact factor: 15.419

3.  Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to α-l-fucosidases from GH29.

Authors:  Chelsea Vickers; Feng Liu; Kento Abe; Orly Salama-Alber; Meredith Jenkins; Christopher M K Springate; John E Burke; Stephen G Withers; Alisdair B Boraston
Journal:  J Biol Chem       Date:  2018-10-03       Impact factor: 5.157

Review 4.  Harnessing glycoenzyme engineering for synthesis of bioactive oligosaccharides.

Authors:  Mounir Benkoulouche; Régis Fauré; Magali Remaud-Siméon; Claire Moulis; Isabelle André
Journal:  Interface Focus       Date:  2019-02-15       Impact factor: 3.906

5.  Synthesis of fucosyl-N-acetylglucosamine disaccharides by transfucosylation using α-L-fucosidases from Lactobacillus casei.

Authors:  Jesús Rodríguez-Díaz; Rodrigo J Carbajo; Antonio Pineda-Lucena; Vicente Monedero; María J Yebra
Journal:  Appl Environ Microbiol       Date:  2013-03-29       Impact factor: 4.792

Review 6.  Chemoenzymatic Methods for the Synthesis of Glycoproteins.

Authors:  Chao Li; Lai-Xi Wang
Journal:  Chem Rev       Date:  2018-08-24       Impact factor: 60.622

7.  Crystal structures of a glycoside hydrolase family 20 lacto-N-biosidase from Bifidobacterium bifidum.

Authors:  Tasuku Ito; Takane Katayama; Mitchell Hattie; Haruko Sakurama; Jun Wada; Ryuichiro Suzuki; Hisashi Ashida; Takayoshi Wakagi; Kenji Yamamoto; Keith A Stubbs; Shinya Fushinobu
Journal:  J Biol Chem       Date:  2013-03-11       Impact factor: 5.157

8.  Structure and substrate specificity of a eukaryotic fucosidase from Fusarium graminearum.

Authors:  Hongnan Cao; Jonathan D Walton; Phil Brumm; George N Phillips
Journal:  J Biol Chem       Date:  2014-08-01       Impact factor: 5.157

9.  Designer α1,6-Fucosidase Mutants Enable Direct Core Fucosylation of Intact N-Glycopeptides and N-Glycoproteins.

Authors:  Chao Li; Shilei Zhu; Christopher Ma; Lai-Xi Wang
Journal:  J Am Chem Soc       Date:  2017-10-16       Impact factor: 15.419

10.  Functional exploration of the GH29 fucosidase family.

Authors:  Hendrik Grootaert; Linde Van Landuyt; Paco Hulpiau; Nico Callewaert
Journal:  Glycobiology       Date:  2020-08-20       Impact factor: 4.313

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