Literature DB >> 1356439

Mechanistic consequences of mutation of the active site nucleophile Glu 358 in Agrobacterium beta-glucosidase.

S G Withers1, K Rupitz, D Trimbur, R A Warren.   

Abstract

The replacement of the active site nucleophile Glu 358 in Agrobacterium beta-glucosidase by Asn and Gln by site-directed mutagenesis results in essentially complete inactivation of the enzyme, while replacement by Asp generates a mutant with a rate constant for the first step, formation of the glycosylenzyme, some 2500 times lower than that of the native enzyme. This low activity is shown to be a true property of the mutant and not due to contaminating wild-type enzyme by active site titration studies and also through studies of its thermal denaturation and of the pH dependence of the reaction catalyzed. Binding of ground-state inhibitors is affected relatively little by the mutation, while binding of transition-state analogues is greatly impaired, consistent with a principal role for Glu 358 being in transition-state stabilization, not substrate binding. Determination of kinetic parameters for a series of aryl glucosides revealed that the glycosylation step is rate determining for all these substrates in contrast to the native enzyme, where a switch from rate-limiting glycosylation to rate-limiting deglycosylation was observed as substrate reactivity was increased. These results coupled with secondary deuterium kinetic isotope effects of kH/kD = 1.17 and 1.12 measured for the 2,4-dinitrophenyl and p-nitrophenyl glucosides point to a principal role of the nucleophile in stabilizing the cationic transition states and in formation of the covalent intermediate.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1992        PMID: 1356439     DOI: 10.1021/bi00156a017

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Characterization of the Glu and Asp residues in the active site of human beta-hexosaminidase B.

Authors:  Y Hou; D J Vocadlo; A Leung; S G Withers; D Mahuran
Journal:  Biochemistry       Date:  2001-02-20       Impact factor: 3.162

2.  Phospho-beta-glucosidase from Fusobacterium mortiferum: purification, cloning, and inactivation by 6-phosphoglucono-delta-lactone.

Authors:  J Thompson; S A Robrish; C L Bouma; D I Freedberg; J E Folk
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

3.  Mechanistic consequences of replacing the active-site nucleophile Glu-358 in Agrobacterium sp. beta-glucosidase with a cysteine residue.

Authors:  S L Lawson; R A Warren; S G Withers
Journal:  Biochem J       Date:  1998-02-15       Impact factor: 3.857

4.  Proteolytic Cleavage Driven by Glycosylation.

Authors:  Miriam P Kötzler; Stephen G Withers
Journal:  J Biol Chem       Date:  2015-10-29       Impact factor: 5.157

5.  Catalytic mechanism of a family 3 beta-glucosidase and mutagenesis study on residue Asp-247.

Authors:  Y K Li; J Chir; F Y Chen
Journal:  Biochem J       Date:  2001-05-01       Impact factor: 3.857

6.  Characterization of the celB gene coding for beta-glucosidase from the hyperthermophilic archaeon Pyrococcus furiosus and its expression and site-directed mutation in Escherichia coli.

Authors:  W G Voorhorst; R I Eggen; E J Luesink; W M de Vos
Journal:  J Bacteriol       Date:  1995-12       Impact factor: 3.490

7.  Large changes of transition-state structure during experimental evolution of an enzyme.

Authors:  K Srinivasan; A Konstantinidis; M L Sinnott; B G Hall
Journal:  Biochem J       Date:  1993-04-01       Impact factor: 3.857

8.  Cloning and characterization of a gene encoding a cell-bound, extracellular beta-glucosidase in the yeast Candida wickerhamii.

Authors:  C D Skory; S N Freer
Journal:  Appl Environ Microbiol       Date:  1995-02       Impact factor: 4.792

9.  Probing the catalytic roles of n2-site glutamate residues in Escherichia coli glutamine synthetase by mutagenesis.

Authors:  M R Witmer; D Palmieri-Young; J J Villafranca
Journal:  Protein Sci       Date:  1994-10       Impact factor: 6.725

10.  Mutational and crystallographic analyses of the active site residues of the Bacillus circulans xylanase.

Authors:  W W Wakarchuk; R L Campbell; W L Sung; J Davoodi; M Yaguchi
Journal:  Protein Sci       Date:  1994-03       Impact factor: 6.725

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