Literature DB >> 11329289

Characterization of the Glu and Asp residues in the active site of human beta-hexosaminidase B.

Y Hou1, D J Vocadlo, A Leung, S G Withers, D Mahuran.   

Abstract

Human beta-hexosaminidase A (alpha beta) and B (beta beta) are composed of subunits (alpha and beta) that are 60% identical and have been grouped with other evolutionarily related glycosidases into "Family 20". The three-dimensional structure of only one Family 20 member has been elucidated, a bacterial chitobiase. This enzyme shares primary structure homology with both the human subunits only in its active-site region, and even in this restricted area, the level of identity is only 26%. Thus, the validity of the molecular model for the active site of the human enzyme based on chitobiase must be determined experimentally. In this report, we analyze highly purified mutant forms of human hexosaminidase B that have had conservative substitutions made at Glu and Asp residues predicted by the chitobiase model to be part of its active site. Mutation of beta Glu(355) to Gln reduces k(cat) 5000-fold with only a small effect on K(m), while also shifting the pH optimum. These effects are consistent with assignment of this residue as the acid/base catalytic residue. Similarly, mutation of beta Asp(354) to Asn reduced k(cat) 2000-fold while leaving K(m) essentially unaltered, consistent with assignment of this residue as the residue that interacts with the substrate acetamide group to promote its attack on the anomeric center. These data in conjunction with the mutagenesis studies of Asp(241) and Glu(491) indicate that the molecular model is substantially accurate in its identification of catalytically important residues.

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Year:  2001        PMID: 11329289      PMCID: PMC2910085          DOI: 10.1021/bi002018s

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  28 in total

1.  Role of beta Arg211 in the active site of human beta-hexosaminidase B.

Authors:  Y Hou; D Vocadlo; S Withers; D Mahuran
Journal:  Biochemistry       Date:  2000-05-23       Impact factor: 3.162

Review 2.  Mutagenesis of glycosidases.

Authors:  H D Ly; S G Withers
Journal:  Annu Rev Biochem       Date:  1999       Impact factor: 23.643

3.  X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the alpha-amylase family.

Authors:  J C Uitdehaag; R Mosi; K H Kalk; B A van der Veen; L Dijkhuizen; S G Withers; B W Dijkstra
Journal:  Nat Struct Biol       Date:  1999-05

4.  Sugar ring distortion in the glycosyl-enzyme intermediate of a family G/11 xylanase.

Authors:  G Sidhu; S G Withers; N T Nguyen; L P McIntosh; L Ziser; G D Brayer
Journal:  Biochemistry       Date:  1999-04-27       Impact factor: 3.162

5.  Protein measurement with the Folin phenol reagent.

Authors:  O H LOWRY; N J ROSEBROUGH; A L FARR; R J RANDALL
Journal:  J Biol Chem       Date:  1951-11       Impact factor: 5.157

6.  Snapshots along an enzymatic reaction coordinate: analysis of a retaining beta-glycoside hydrolase.

Authors:  G J Davies; L Mackenzie; A Varrot; M Dauter; A M Brzozowski; M Schülein; S G Withers
Journal:  Biochemistry       Date:  1998-08-25       Impact factor: 3.162

Review 7.  Biochemical consequences of mutations causing the GM2 gangliosidoses.

Authors:  D J Mahuran
Journal:  Biochim Biophys Acta       Date:  1999-10-08

8.  The subunit and polypeptide structure of hexosaminidases from human placenta.

Authors:  D Mahuran; J A Lowden
Journal:  Can J Biochem       Date:  1980-04

9.  Structures of chitobiase mutants complexed with the substrate Di-N-acetyl-d-glucosamine: the catalytic role of the conserved acidic pair, aspartate 539 and glutamate 540.

Authors:  G Prag; Y Papanikolau; G Tavlas; C E Vorgias; K Petratos; A B Oppenheim
Journal:  J Mol Biol       Date:  2000-07-14       Impact factor: 5.469

10.  Variant of GM2-gangliosidosis with hexosaminidase A having a severely changed substrate specificity.

Authors:  H J Kytzia; U Hinrichs; I Maire; K Suzuki; K Sandhoff
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  11 in total

1.  An alpha-subunit loop structure is required for GM2 activator protein binding by beta-hexosaminidase A.

Authors:  Maryam Zarghooni; Scott Bukovac; Michael Tropak; John Callahan; Don Mahuran
Journal:  Biochem Biophys Res Commun       Date:  2004-11-19       Impact factor: 3.575

2.  Mammalian cells contain a second nucleocytoplasmic hexosaminidase.

Authors:  Martin Gutternigg; Dubravko Rendić; Regina Voglauer; Thomas Iskratsch; Iain B H Wilson
Journal:  Biochem J       Date:  2009-04-01       Impact factor: 3.857

3.  Mechanism, Structure, and Inhibition of O-GlcNAc Processing Enzymes.

Authors:  Tracey M Gloster; David J Vocadlo
Journal:  Curr Signal Transduct Ther       Date:  2010-01

4.  Identification of the gene encoding the enzyme deficient in mucopolysaccharidosis IIIC (Sanfilippo disease type C).

Authors:  Xiaolian Fan; Huiwen Zhang; Sunqu Zhang; Richard D Bagshaw; Michael B Tropak; John W Callahan; Don J Mahuran
Journal:  Am J Hum Genet       Date:  2006-08-23       Impact factor: 11.025

5.  Crystal structure of human beta-hexosaminidase B: understanding the molecular basis of Sandhoff and Tay-Sachs disease.

Authors:  Brian L Mark; Don J Mahuran; Maia M Cherney; Dalian Zhao; Spencer Knapp; Michael N G James
Journal:  J Mol Biol       Date:  2003-04-11       Impact factor: 5.469

6.  Identification of the 6-sulfate binding site unique to alpha-subunit-containing isozymes of human beta-hexosaminidase.

Authors:  R Sharma; H Deng; A Leung; D Mahuran
Journal:  Biochemistry       Date:  2001-05-08       Impact factor: 3.162

7.  Crystal structures of a glycoside hydrolase family 20 lacto-N-biosidase from Bifidobacterium bifidum.

Authors:  Tasuku Ito; Takane Katayama; Mitchell Hattie; Haruko Sakurama; Jun Wada; Ryuichiro Suzuki; Hisashi Ashida; Takayoshi Wakagi; Kenji Yamamoto; Keith A Stubbs; Shinya Fushinobu
Journal:  J Biol Chem       Date:  2013-03-11       Impact factor: 5.157

8.  A single site in human beta-hexosaminidase A binds both 6-sulfate-groups on hexosamines and the sialic acid moiety of GM2 ganglioside.

Authors:  Rohita Sharma; Scott Bukovac; John Callahan; Don Mahuran
Journal:  Biochim Biophys Acta       Date:  2003-01-20

9.  Biosynthesis of truncated N-linked oligosaccharides results from non-orthologous hexosaminidase-mediated mechanisms in nematodes, plants, and insects.

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Journal:  J Biol Chem       Date:  2007-07-18       Impact factor: 5.157

10.  Mechanism of Human Nucleocytoplasmic Hexosaminidase D.

Authors:  Matthew G Alteen; Verena Oehler; Ivana Nemčovičová; Iain B H Wilson; David J Vocadlo; Tracey M Gloster
Journal:  Biochemistry       Date:  2016-05-05       Impact factor: 3.162

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