Literature DB >> 1346502

Substitution of glutamic acid 109 by aspartic acid alters the substrate specificity and catalytic activity of the beta-subunit in the tryptophan synthase bienzyme complex from Salmonella typhimurium.

P S Brzović1, A M Kayastha, E W Miles, M F Dunn.   

Abstract

In an effort to understand the catalytic mechanism of the tryptophan synthase beta-subunit from Salmonella typhimurium, possible functional active site residues have been identified (on the basis of the 3-D crystal structure of the bienzyme complex) and targeted for analysis utilizing site-directed mutagenesis. The chromophoric properties of the pyridoxal 5'-phosphate cofactor provide a particularly convenient and sensitive spectral probe to directly investigate changes in catalytic events which occur upon modification of the beta-subunit. Substitution of Asp for Glu 109 in the beta-subunit was found to alter both the catalytic activity and the substrate specificity of the beta-reaction. Steady-state kinetic data reveal that the beta-reaction catalyzed by the beta E109D alpha 2 beta 2 mutant enzyme complex is reduced 27-fold compared to the wild-type enzyme. Rapid-scanning stopped-flow (RSSF) UV-visible spectroscopy shows that the mutation does not seriously affect the pre-steady-state reaction of the beta E109D mutant with L-serine to form the alpha-aminoacrylate intermediate, E(A-A). Binding of the alpha-subunit specific ligand, alpha-glycerol phosphate (GP) to the alpha 2 beta 2 complex exerts the same allosteric effects on the beta-subunit as observed with the wild-type enzyme. However, the pre-steady-state spectral changes for the reaction of indole with E(A-A) show that the formation of the L-tryptophan quinonoid, E(Q3), is drastically altered. Discrimination against E(Q3) formation is also observed for the binding of L-tryptophan to the mutant alpha 2 beta 2 complex in the reverse reaction. In contrast, substitution of Asp for Glu 109 increases the apparent affinity of the beta E109D alpha-aminoacrylate complex for the indole analogue indoline and results in the increased rate of synthesis of the amino acid product dihydroiso-L-tryptophan. Thus, the mutation affects the covalent bond forming addition reactions and the nucleophile specificity of the beta-reaction catalyzed by the bienzyme complex.

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Year:  1992        PMID: 1346502     DOI: 10.1021/bi00119a030

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Effects of hydrostatic pressure on the conformational equilibrium of tryptophan synthase from Salmonella typhimurium.

Authors:  Robert S Phillips; Edith W Miles; Peter McPhie; Stephane Marchal; Reinhard Lange; Georg Holtermann; Roger S Goody
Journal:  Ann N Y Acad Sci       Date:  2010-02       Impact factor: 5.691

Review 2.  Allosteric regulation of substrate channeling and catalysis in the tryptophan synthase bienzyme complex.

Authors:  Michael F Dunn
Journal:  Arch Biochem Biophys       Date:  2012-02-02       Impact factor: 4.013

Review 3.  Tryptophan synthase: a mine for enzymologists.

Authors:  Samanta Raboni; Stefano Bettati; Andrea Mozzarelli
Journal:  Cell Mol Life Sci       Date:  2009-04-22       Impact factor: 9.261

4.  The tryptophan synthase α2β2 complex: a model for substrate channeling, allosteric communication, and pyridoxal phosphate catalysis.

Authors:  Edith Wilson Miles
Journal:  J Biol Chem       Date:  2013-02-20       Impact factor: 5.157

5.  Switches of hydrogen bonds during ligand-protein association processes determine binding kinetics.

Authors:  Yu-ming M Huang; Myungshim Kang; Chia-en A Chang
Journal:  J Mol Recognit       Date:  2014-09       Impact factor: 2.137

6.  Catalytic roles of βLys87 in tryptophan synthase: (15)N solid state NMR studies.

Authors:  Bethany G Caulkins; Chen Yang; Eduardo Hilario; Li Fan; Michael F Dunn; Leonard J Mueller
Journal:  Biochim Biophys Acta       Date:  2015-02-14

7.  Protonation states and catalysis: Molecular dynamics studies of intermediates in tryptophan synthase.

Authors:  Yu-Ming M Huang; Wanli You; Bethany G Caulkins; Michael F Dunn; Leonard J Mueller; Chia-En A Chang
Journal:  Protein Sci       Date:  2015-09-22       Impact factor: 6.725

Review 8.  Genetic map of Salmonella typhimurium, edition VIII.

Authors:  K E Sanderson; A Hessel; K E Rudd
Journal:  Microbiol Rev       Date:  1995-06

9.  The mouse mutants recoil wobbler and nmf373 represent a series of Grm1 mutations.

Authors:  Andrew J Sachs; Jamie K Schwendinger; Andy W Yang; Neena B Haider; Arne M Nystuen
Journal:  Mamm Genome       Date:  2007-10-13       Impact factor: 2.957

10.  Directed Evolution Mimics Allosteric Activation by Stepwise Tuning of the Conformational Ensemble.

Authors:  Andrew R Buller; Paul van Roye; Jackson K B Cahn; Remkes A Scheele; Michael Herger; Frances H Arnold
Journal:  J Am Chem Soc       Date:  2018-05-17       Impact factor: 15.419

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