Literature DB >> 23426371

The tryptophan synthase α2β2 complex: a model for substrate channeling, allosteric communication, and pyridoxal phosphate catalysis.

Edith Wilson Miles1.   

Abstract

I reflect on my research on pyridoxal phosphate (PLP) enzymes over fifty-five years and on how I combined research with marriage and family. My Ph.D. research with Esmond E. Snell established one aspect of PLP enzyme mechanism. My postdoctoral work first with Hans L. Kornberg and then with Alton Meister characterized the structure and function of another PLP enzyme, l-aspartate β-decarboxylase. My independent research at the National Institutes of Health (NIH) since 1966 has focused on the bacterial tryptophan synthase α2β2 complex. The β subunit catalyzes a number of PLP-dependent reactions. We have characterized these reactions and the allosteric effects of the α subunit. We also used chemical modification to probe enzyme structure and function. Our crystallization of the tryptophan synthase α2β2 complex from Salmonella typhimurium led to the determination of the three-dimensional structure with Craig Hyde and David Davies at NIH in 1988. This landmark structure was the first structure of a multienzyme complex and the first structure revealing an intramolecular tunnel. The structure has provided a basis for exploring mechanisms of catalysis, channeling, and allosteric communication in the tryptophan synthase α2β2 complex. The structure serves as a model for many other multiprotein complexes that are important for biological processes in prokaryotes and eukaryotes.

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Year:  2013        PMID: 23426371      PMCID: PMC3617248          DOI: 10.1074/jbc.X113.463331

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  36 in total

1.  PROPERTIES OF CRYSTALLINE L-ASPARTATE 4-CARBOXY-LYASE FROM ACHROMOBACTER SP.

Authors:  E M WILSON; H L KORNBERG
Journal:  Biochem J       Date:  1963-09       Impact factor: 3.857

2.  Metabolism of alpha-methylserine. I. alpha-Methylserine hydroxymethyltransferase.

Authors:  E M WILSON; E E SNELL
Journal:  J Biol Chem       Date:  1962-10       Impact factor: 5.157

3.  Metabolism of alpha-methylserine. II. Stereospecificity of alpha-methylserine hydroxymethyl-transferase.

Authors:  E M WILSON; E E SNELL
Journal:  J Biol Chem       Date:  1962-10       Impact factor: 5.157

4.  Microspectrophotometric studies on single crystals of the tryptophan synthase alpha 2 beta 2 complex demonstrate formation of enzyme-substrate intermediates.

Authors:  A Mozzarelli; A Peracchi; G L Rossi; S A Ahmed; E W Miles
Journal:  J Biol Chem       Date:  1989-09-25       Impact factor: 5.157

5.  The B protein of Escherichia coli tryptophan synthetase. I. Effects of sulfhydryl modification on enzymatic activities and subunit interaction.

Authors:  E W Miles
Journal:  J Biol Chem       Date:  1970-11-25       Impact factor: 5.157

6.  A new thiol-dependent transamination reaction catalyzed by the B protein of Escherichia coli tryptophan synthetase.

Authors:  E W Miles; M Hatanaka; I P Crawford
Journal:  Biochemistry       Date:  1968-08       Impact factor: 3.162

7.  Guanidine hydrochloride induced unfolding of the alpha subunit of tryptophan synthase and of the two alpha proteolytic fragments: evidence for stepwise unfolding of the two alpha domains.

Authors:  E W Miles; K Yutani; K Ogasahara
Journal:  Biochemistry       Date:  1982-05-25       Impact factor: 3.162

8.  The mechanism of the reaction of beta-hydroxyaspartate with L-aspartate beta-decarboxylase. A new type of pyridoxal 5'-phosphate-enzyme inhibition.

Authors:  E W Miles; A Meister
Journal:  Biochemistry       Date:  1967-06       Impact factor: 3.162

9.  The beta subunit of tryptophan synthase. Clarification of the roles of histidine 86, lysine 87, arginine 148, cysteine 170, and cysteine 230.

Authors:  E W Miles; H Kawasaki; S A Ahmed; H Morita; H Morita; S Nagata
Journal:  J Biol Chem       Date:  1989-04-15       Impact factor: 5.157

10.  Interactions of tryptophan synthase, tryptophanase, and pyridoxal phosphate with oxindolyl-L-alanine and 2,3-dihydro-L-tryptophan: support for an indolenine intermediate in tryptophan metabolism.

Authors:  R S Phillips; E W Miles; L A Cohen
Journal:  Biochemistry       Date:  1984-12-04       Impact factor: 3.162

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  10 in total

1.  Analysis of allosteric communication in a multienzyme complex by ancestral sequence reconstruction.

Authors:  Michael Schupfner; Kristina Straub; Florian Busch; Rainer Merkl; Reinhard Sterner
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-23       Impact factor: 11.205

2.  Quaternary Structure of the Tryptophan Synthase α-Subunit Homolog BX1 from Zea mays.

Authors:  Andrew Norris; Florian Busch; Michael Schupfner; Reinhard Sterner; Vicki H Wysocki
Journal:  J Am Soc Mass Spectrom       Date:  2020-01-13       Impact factor: 3.109

3.  Ammonia generation by tryptophan synthase drives a key genetic difference between genital and ocular Chlamydia trachomatis isolates.

Authors:  Shardulendra P Sherchand; Ashok Aiyar
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-16       Impact factor: 11.205

Review 4.  Surface-induced Dissociation Mass Spectrometry as a Structural Biology Tool.

Authors:  Dalton T Snyder; Sophie R Harvey; Vicki H Wysocki
Journal:  Chem Rev       Date:  2021-11-02       Impact factor: 72.087

5.  A multienzyme complex channels substrates and electrons through acetyl-CoA and methane biosynthesis pathways in Methanosarcina.

Authors:  Dillon J Lieber; Jennifer Catlett; Nandu Madayiputhiya; Renu Nandakumar; Madeline M Lopez; William W Metcalf; Nicole R Buan
Journal:  PLoS One       Date:  2014-09-18       Impact factor: 3.240

6.  Metabolic Complementation in Bacterial Communities: Necessary Conditions and Optimality.

Authors:  Matteo Mori; Miguel Ponce-de-León; Juli Peretó; Francisco Montero
Journal:  Front Microbiol       Date:  2016-10-07       Impact factor: 5.640

Review 7.  The Uniqueness of Tryptophan in Biology: Properties, Metabolism, Interactions and Localization in Proteins.

Authors:  Sailen Barik
Journal:  Int J Mol Sci       Date:  2020-11-20       Impact factor: 5.923

Review 8.  Structural Basis for Allostery in PLP-dependent Enzymes.

Authors:  Jenny U Tran; Breann L Brown
Journal:  Front Mol Biosci       Date:  2022-04-25

Review 9.  Allosteric regulation of substrate channeling: Salmonella typhimurium tryptophan synthase.

Authors:  Rittik K Ghosh; Eduardo Hilario; Chia-En A Chang; Leonard J Mueller; Michael F Dunn
Journal:  Front Mol Biosci       Date:  2022-09-12

Review 10.  Influence of the tryptophan-indole-IFNγ axis on human genital Chlamydia trachomatis infection: role of vaginal co-infections.

Authors:  Ashok Aiyar; Alison J Quayle; Lyndsey R Buckner; Shardulendra P Sherchand; Theresa L Chang; Arnold H Zea; David H Martin; Robert J Belland
Journal:  Front Cell Infect Microbiol       Date:  2014-06-03       Impact factor: 5.293

  10 in total

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