Literature DB >> 12973298

The organization of the microbial biodegradation network from a systems-biology perspective.

Florencio Pazos1, Alfonso Valencia, Víctor De Lorenzo.   

Abstract

Microbial biodegradation of environmental pollutants is a field of growing importance because of its potential use in bioremediation and biocatalysis. We have studied the characteristics of the global biodegradation network that is brought about by all the known chemical reactions that are implicated in this process, regardless of their microbial hosts. This combination produces an efficient and integrated suprametabolism, with properties similar to those that define metabolic networks in single organisms. The characteristics of this network support an evolutionary scenario in which the reactions evolved outwards from the central metabolism. The properties of the global biodegradation network have implications for predicting the fate of current and future environmental pollutants.

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Year:  2003        PMID: 12973298      PMCID: PMC1326392          DOI: 10.1038/sj.embor.embor933

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  34 in total

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3.  The University of Minnesota Biocatalysis/Biodegradation Database: emphasizing enzymes.

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Review 7.  Biodegradation, biotransformation, and biocatalysis (b3).

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Review 9.  Measuring protein-protein interactions.

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  7 in total

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Review 2.  Metagenomics and the niche concept.

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3.  Polycyclic aromatic hydrocarbon metabolic network in Mycobacterium vanbaalenii PYR-1.

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6.  MetaRouter: bioinformatics for bioremediation.

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7.  The environmental fate of organic pollutants through the global microbial metabolism.

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  7 in total

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