Literature DB >> 12938771

Methods for first-order kernel estimation: simple-cell receptive fields from responses to natural scenes.

Ben Willmore1, Darragh Smyth.   

Abstract

Recent studies have recovered receptive-field maps of simple cells in visual cortex from their responses to natural scene stimuli. Natural scenes have many theoretical and practical advantages over traditional, artificial stimuli; however, the receptive-field estimation methods are more complex than for white-noise stimuli. Here, we describe and justify several of these methods-spectral correction of the reverse correlation estimate, direct least-squares solution, iterative least-squares algorithms and regularized least-squares solutions. We investigate the pros and cons of the different methods, and evaluate them in a head-to-head comparison for simulated simple-cell data. This shows that, at least for quasilinear simulated simple cells, a regularized solution ('reginv') is most efficient, requiring fewer stimulus presentations for high-resolution reconstruction of the first-order kernel. We also investigate several practical issues that determine the success of this kind of experiment-the effects of neuronal nonlinearities, response variability and the choice of stimulus regime.

Mesh:

Year:  2003        PMID: 12938771

Source DB:  PubMed          Journal:  Network        ISSN: 0954-898X            Impact factor:   1.273


  11 in total

1.  Natural stimulus statistics alter the receptive field structure of v1 neurons.

Authors:  Stephen V David; William E Vinje; Jack L Gallant
Journal:  J Neurosci       Date:  2004-08-04       Impact factor: 6.167

2.  Responses of V1 neurons to two-dimensional hermite functions.

Authors:  Jonathan D Victor; Ferenc Mechler; Michael A Repucci; Keith P Purpura; Tatyana Sharpee
Journal:  J Neurophysiol       Date:  2005-09-07       Impact factor: 2.714

3.  Sound representation methods for spectro-temporal receptive field estimation.

Authors:  Patrick Gill; Junli Zhang; Sarah M N Woolley; Thane Fremouw; Frédéric E Theunissen
Journal:  J Comput Neurosci       Date:  2006-04-22       Impact factor: 1.621

4.  The berkeley wavelet transform: a biologically inspired orthogonal wavelet transform.

Authors:  Ben Willmore; Ryan J Prenger; Michael C-K Wu; Jack L Gallant
Journal:  Neural Comput       Date:  2008-06       Impact factor: 2.026

5.  Neural representation of natural images in visual area V2.

Authors:  Ben D B Willmore; Ryan J Prenger; Jack L Gallant
Journal:  J Neurosci       Date:  2010-02-10       Impact factor: 6.167

6.  Incorporating Midbrain Adaptation to Mean Sound Level Improves Models of Auditory Cortical Processing.

Authors:  Ben D B Willmore; Oliver Schoppe; Andrew J King; Jan W H Schnupp; Nicol S Harper
Journal:  J Neurosci       Date:  2016-01-13       Impact factor: 6.167

7.  A psychophysical imaging method evidencing auditory cue extraction during speech perception: a group analysis of auditory classification images.

Authors:  Léo Varnet; Kenneth Knoblauch; Willy Serniclaes; Fanny Meunier; Michel Hoen
Journal:  PLoS One       Date:  2015-03-17       Impact factor: 3.240

8.  Efficient temporal processing of naturalistic sounds.

Authors:  Nicholas A Lesica; Benedikt Grothe
Journal:  PLoS One       Date:  2008-02-27       Impact factor: 3.240

9.  Estimating receptive fields from responses to natural stimuli with asymmetric intensity distributions.

Authors:  Nicholas A Lesica; Toshiyuki Ishii; Garrett B Stanley; Toshihiko Hosoya
Journal:  PLoS One       Date:  2008-08-26       Impact factor: 3.240

10.  Model Constrained by Visual Hierarchy Improves Prediction of Neural Responses to Natural Scenes.

Authors:  Ján Antolík; Sonja B Hofer; James A Bednar; Thomas D Mrsic-Flogel
Journal:  PLoS Comput Biol       Date:  2016-06-27       Impact factor: 4.475

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