Literature DB >> 1291239

A human DNA replication origin: localization and transcriptional characterization.

G Biamonti1, G Perini, F Weighardt, S Riva, M Giacca, P Norio, L Zentilin, S Diviacco, D Dimitrova, A Falaschi.   

Abstract

A single-copy 13.7 kb human DNA region (L30E) located on Ch. 19 p13.3 contains an origin of DNA replication in myeloid HL-60 cells. The origin was localized, by means of quantitative PCR within approximately 3000 bp, in a highly transcribed region containing at least two closely spaced genes with the same polarity of transcription, one encoding lamin B2 and the other an unidentified protein. The origin region overlaps an undermethylated "CpG island" at the 5'-end of the second transcription unit. A binding site (CACGTG) for basic helix-loop-helix (bHLH) DNA binding proteins such as USF/MLTF or MYC-MAX was located by DNase I footprinting analysis in the promoter of the second gene. DMSO differentiation of HL-60 cells, that completely shuts off replication, also drastically reduces the transcription of L30E region. On the other hand such treatment does not modify the methylation pattern of the CpG island and does not abolish the DNase I protection of the bHLH binding site.

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Year:  1992        PMID: 1291239     DOI: 10.1007/bf02451782

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  37 in total

Review 1.  New beginnings in studies of eukaryotic DNA replication origins.

Authors:  R M Umek; M H Linskens; D Kowalski; J A Huberman
Journal:  Biochim Biophys Acta       Date:  1989-01-23

2.  Purification of BrdUrd-substituted DNA by immunoaffinity chromatography with anti-BrdUrd antibodies.

Authors:  G Contreas; M Giacca; A Falaschi
Journal:  Biotechniques       Date:  1992-06       Impact factor: 1.993

Review 3.  Simple and complex cell cycles.

Authors:  F Cross; J Roberts; H Weintraub
Journal:  Annu Rev Cell Biol       Date:  1989

4.  Characterization of human DNA sequences synthesized at the onset of S-phase.

Authors:  C Tribioli; G Biamonti; M Giacca; M Colonna; S Riva; A Falaschi
Journal:  Nucleic Acids Res       Date:  1987-12-23       Impact factor: 16.971

5.  Activation and repression of a beta-globin gene in cell hybrids is accompanied by a shift in its temporal replication.

Authors:  V Dhar; A I Skoultchi; C L Schildkraut
Journal:  Mol Cell Biol       Date:  1989-08       Impact factor: 4.272

Review 6.  Transcriptional elements as components of eukaryotic origins of DNA replication.

Authors:  M L DePamphilis
Journal:  Cell       Date:  1988-03-11       Impact factor: 41.582

7.  Cis-acting negative control of DNA replication in eukaryotic cells.

Authors:  J M Roberts; H Weintraub
Journal:  Cell       Date:  1988-02-12       Impact factor: 41.582

8.  Cloned origin of DNA replication in c-myc gene can function and be transmitted in transgenic mice in an episomal state.

Authors:  K Sudo; M Ogata; Y Sato; S M Iguchi-Ariga; H Ariga
Journal:  Nucleic Acids Res       Date:  1990-09-25       Impact factor: 16.971

9.  Sequence-specific DNA binding by the c-Myc protein.

Authors:  T K Blackwell; L Kretzner; E M Blackwood; R N Eisenman; H Weintraub
Journal:  Science       Date:  1990-11-23       Impact factor: 47.728

10.  The MYC protein activates transcription of the alpha-prothymosin gene.

Authors:  M Eilers; S Schirm; J M Bishop
Journal:  EMBO J       Date:  1991-01       Impact factor: 11.598

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  23 in total

1.  Enhanced flexibility and aphidicolin-induced DNA breaks near mammalian replication origins: implications for replicon mapping and chromosome fragility.

Authors:  F Toledo; A Coquelle; E Svetlova; M Debatisse
Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

2.  Site-specific and temporally controlled initiation of DNA replication in a human cell-free system.

Authors:  Christian Keller; Olivier Hyrien; Rolf Knippers; Torsten Krude
Journal:  Nucleic Acids Res       Date:  2002-05-15       Impact factor: 16.971

3.  Specific signals at the 3' end of the DHFR gene define one boundary of the downstream origin of replication.

Authors:  Larry D Mesner; Joyce L Hamlin
Journal:  Genes Dev       Date:  2005-05-01       Impact factor: 11.361

4.  Identification of a binding region for human origin recognition complex proteins 1 and 2 that coincides with an origin of DNA replication.

Authors:  Eva-Maria Ladenburger; Christian Keller; Rolf Knippers
Journal:  Mol Cell Biol       Date:  2002-02       Impact factor: 4.272

5.  In vivo protein-DNA interactions at human DNA replication origin.

Authors:  D S Dimitrova; M Giacca; F Demarchi; G Biamonti; S Riva; A Falaschi
Journal:  Proc Natl Acad Sci U S A       Date:  1996-02-20       Impact factor: 11.205

6.  Induction of DNA replication by transcription in the region upstream of the human c-myc gene in a model replication system.

Authors:  R Ohba; K Matsumoto; Y Ishimi
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

7.  Utilization of the same DNA replication origin by human cells of different derivation.

Authors:  S Kumar; M Giacca; P Norio; G Biamonti; S Riva; A Falaschi
Journal:  Nucleic Acids Res       Date:  1996-09-01       Impact factor: 16.971

8.  oriGNAI3: a narrow zone of preferential replication initiation in mammalian cells identified by 2D gel and competitive PCR replicon mapping techniques.

Authors:  F Toledo; B Baron; M A Fernandez; A M Lachagès; V Mayau; G Buttin; M Debatisse
Journal:  Nucleic Acids Res       Date:  1998-05-15       Impact factor: 16.971

9.  High-resolution mapping of the origin of DNA replication in the hamster dihydrofolate reductase gene domain by competitive PCR.

Authors:  C Pelizon; S Diviacco; A Falaschi; M Giacca
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

10.  Genomic study of replication initiation in human chromosomes reveals the influence of transcription regulation and chromatin structure on origin selection.

Authors:  Neerja Karnani; Christopher M Taylor; Ankit Malhotra; Anindya Dutta
Journal:  Mol Biol Cell       Date:  2009-12-02       Impact factor: 4.138

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