Literature DB >> 11809796

Identification of a binding region for human origin recognition complex proteins 1 and 2 that coincides with an origin of DNA replication.

Eva-Maria Ladenburger1, Christian Keller, Rolf Knippers.   

Abstract

We investigated the binding regions of components of the origin recognition complex (ORC) in the human genome. For this purpose, we performed chromatin immunoprecipitation assays with antibodies against human Orc1 and Orc2 proteins. We identified a binding region for human Orc proteins 1 and 2 in a <1-kbp segment between two divergently transcribed human genes. The region is characterized by CpG tracts and a central sequence rich in AT base pairs. Both, Orc1 and Orc2 proteins are found at the intergenic region in the G(1) phase, but S-phase chromatin contains only Orc2 protein, supporting the notion that Orc1p dissociates from its binding site in the S phase. Sequences corresponding to the intergenic region are highly abundant in a fraction of nascent DNA strands, strongly suggesting that this region not only harbors the binding sites for Orc1 protein and Orc2 protein but also serves as an origin of bidirectional DNA replication.

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Year:  2002        PMID: 11809796      PMCID: PMC134626          DOI: 10.1128/MCB.22.4.1036-1048.2002

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  62 in total

1.  Genome-wide location and function of DNA binding proteins.

Authors:  B Ren; F Robert; J J Wyrick; O Aparicio; E G Jennings; I Simon; J Zeitlinger; J Schreiber; N Hannett; E Kanin; T L Volkert; C J Wilson; S P Bell; R A Young
Journal:  Science       Date:  2000-12-22       Impact factor: 47.728

Review 2.  Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation.

Authors:  V Orlando
Journal:  Trends Biochem Sci       Date:  2000-03       Impact factor: 13.807

3.  Start sites of bidirectional DNA synthesis at the human lamin B2 origin.

Authors:  G Abdurashidova; M Deganuto; R Klima; S Riva; G Biamonti; M Giacca; A Falaschi
Journal:  Science       Date:  2000-03-17       Impact factor: 47.728

Review 4.  SV40 large T antigen functions in DNA replication and transformation.

Authors:  D T Simmons
Journal:  Adv Virus Res       Date:  2000       Impact factor: 9.937

5.  Identification and characterization of the human ORC6 homolog.

Authors:  S K Dhar; A Dutta
Journal:  J Biol Chem       Date:  2000-11-10       Impact factor: 5.157

6.  Selective instability of Orc1 protein accounts for the absence of functional origin recognition complexes during the M-G(1) transition in mammals.

Authors:  D A Natale; C J Li; W H Sun; M L DePamphilis
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

7.  Chromatin association of human origin recognition complex, cdc6, and minichromosome maintenance proteins during the cell cycle: assembly of prereplication complexes in late mitosis.

Authors:  J Méndez; B Stillman
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

8.  Nucleosome assembly activity and intracellular localization of human CAF-1 changes during the cell division cycle.

Authors:  K Marheineke; T Krude
Journal:  J Biol Chem       Date:  1998-06-12       Impact factor: 5.157

Review 9.  Replication origins in yeast versus metazoa: separation of the haves and the have nots.

Authors:  D M Gilbert
Journal:  Curr Opin Genet Dev       Date:  1998-04       Impact factor: 5.578

Review 10.  Where it all starts: eukaryotic origins of DNA replication.

Authors:  A K Bielinsky; S A Gerbi
Journal:  J Cell Sci       Date:  2001-02       Impact factor: 5.285

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  67 in total

1.  Site-specific and temporally controlled initiation of DNA replication in a human cell-free system.

Authors:  Christian Keller; Olivier Hyrien; Rolf Knippers; Torsten Krude
Journal:  Nucleic Acids Res       Date:  2002-05-15       Impact factor: 16.971

2.  The latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus supports latent DNA replication in dividing cells.

Authors:  Jianhong Hu; Alexander C Garber; Rolf Renne
Journal:  J Virol       Date:  2002-11       Impact factor: 5.103

3.  Functional domains involved in the interaction between Orc1 and transcriptional repressor AlF-C that bind to an origin/promoter of the rat aldolase B gene.

Authors:  Yasushi Saitoh; Satoru Miyagi; Hiroyoshi Ariga; Ken-ichi Tsutsumi
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

4.  Replication of the chicken beta-globin locus: early-firing origins at the 5' HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications.

Authors:  Marie-Noëlle Prioleau; Marie-Claude Gendron; Olivier Hyrien
Journal:  Mol Cell Biol       Date:  2003-05       Impact factor: 4.272

5.  An episomal mammalian replicon: sequence-independent binding of the origin recognition complex.

Authors:  Daniel Schaarschmidt; Jens Baltin; Isa M Stehle; Hans J Lipps; Rolf Knippers
Journal:  EMBO J       Date:  2003-12-11       Impact factor: 11.598

6.  Multiple ORC-binding sites are required for efficient MCM loading and origin firing in fission yeast.

Authors:  Tatsuro Takahashi; Eri Ohara; Hideo Nishitani; Hisao Masukata
Journal:  EMBO J       Date:  2003-02-17       Impact factor: 11.598

7.  Localization of proteins bound to a replication origin of human DNA along the cell cycle.

Authors:  Gulnara Abdurashidova; Miltcho B Danailov; Alexander Ochem; Gianluca Triolo; Vera Djeliova; Sorina Radulescu; Alessandro Vindigni; Silvano Riva; Arturo Falaschi
Journal:  EMBO J       Date:  2003-08-15       Impact factor: 11.598

8.  Sequence-independent DNA binding and replication initiation by the human origin recognition complex.

Authors:  Sanjay Vashee; Christin Cvetic; Wenyan Lu; Pamela Simancek; Thomas J Kelly; Johannes C Walter
Journal:  Genes Dev       Date:  2003-08-01       Impact factor: 11.361

9.  Accumulation of heterochromatin components on the terminal repeat sequence of Kaposi's sarcoma-associated herpesvirus mediated by the latency-associated nuclear antigen.

Authors:  Shuhei Sakakibara; Keiji Ueda; Ken Nishimura; Eunju Do; Eriko Ohsaki; Toshiomi Okuno; Koichi Yamanishi
Journal:  J Virol       Date:  2004-07       Impact factor: 5.103

10.  Heterochromatin on the inactive X chromosome delays replication timing without affecting origin usage.

Authors:  María Gómez; Neil Brockdorff
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-22       Impact factor: 11.205

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