Literature DB >> 12907802

Nervous system targets of RNA editing identified by comparative genomics.

Barry Hoopengardner1, Tarun Bhalla, Cynthia Staber, Robert Reenan.   

Abstract

An unknown number of precursor messenger RNAs undergo genetic recoding by modification of adenosine to inosine, a reaction catalyzed by the adenosine deaminases acting on RNA (ADARs). Discovery of these edited transcripts has always been serendipitous. Using comparative genomics, we identified a phylogenetic signature of RNA editing. We report the identification and experimental verification of 16 previously unknown ADAR target genes in the fruit fly Drosophila and one in humans-more than the sum total previously reported. All of these genes are involved in rapid electrical and chemical neurotransmission, and many of the edited sites recode conserved and functionally important amino acids. These results point to a pivotal role for RNA editing in nervous system function.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12907802     DOI: 10.1126/science.1086763

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  165 in total

Review 1.  Novel modifications in RNA.

Authors:  Kelly Phelps; Alexi Morris; Peter A Beal
Journal:  ACS Chem Biol       Date:  2011-12-23       Impact factor: 5.100

2.  A transition state analogue for an RNA-editing reaction.

Authors:  Brittany L Haudenschild; Olena Maydanovych; Eduardo A Véliz; Mark R Macbeth; Brenda L Bass; Peter A Beal
Journal:  J Am Chem Soc       Date:  2004-09-15       Impact factor: 15.419

3.  A survey of RNA editing in human brain.

Authors:  Matthew Blow; P Andrew Futreal; Richard Wooster; Michael R Stratton
Journal:  Genome Res       Date:  2004-11-15       Impact factor: 9.043

4.  Fragile balance: RNA editing tunes the synapse.

Authors:  Gary J Bassell
Journal:  Nat Neurosci       Date:  2011-11-23       Impact factor: 24.884

5.  Extra double-stranded RNA binding domain (dsRBD) in a squid RNA editing enzyme confers resistance to high salt environment.

Authors:  Juan Pablo Palavicini; Rodrigo A Correa-Rojas; Joshua J C Rosenthal
Journal:  J Biol Chem       Date:  2012-03-28       Impact factor: 5.157

6.  Accurate identification of A-to-I RNA editing in human by transcriptome sequencing.

Authors:  Jae Hoon Bahn; Jae-Hyung Lee; Gang Li; Christopher Greer; Guangdun Peng; Xinshu Xiao
Journal:  Genome Res       Date:  2011-09-29       Impact factor: 9.043

7.  Activity-dependent A-to-I RNA editing in rat cortical neurons.

Authors:  Neville E Sanjana; Erez Y Levanon; Emily A Hueske; Jessica M Ambrose; Jin Billy Li
Journal:  Genetics       Date:  2012-06-19       Impact factor: 4.562

8.  RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1.

Authors:  Jongchan Yeo; Rena A Goodman; Nicole T Schirle; Sheila S David; Peter A Beal
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-10       Impact factor: 11.205

Review 9.  Substitutional A-to-I RNA editing.

Authors:  Bjorn-Erik Wulff; Kazuko Nishikura
Journal:  Wiley Interdiscip Rev RNA       Date:  2010 Jul-Aug       Impact factor: 9.957

10.  Assessing the validity and reproducibility of genome-scale predictions.

Authors:  Lauren A Sugden; Michael R Tackett; Yiannis A Savva; William A Thompson; Charles E Lawrence
Journal:  Bioinformatics       Date:  2013-09-17       Impact factor: 6.937

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.