Literature DB >> 12905069

The HY2 gene as an efficient marker for transposon excision in Arabidopsis.

B Léonard1, A Creff, T Desnos.   

Abstract

Transposable elements can generate germinal and somatic mutations, and hence represent a powerful tool for the analysis of gene function. Transposons from maize have been adapted to mutagenise the genomes of diverse species. The efficiency of these systems partly relies on the ease with which germinal (i.e. germinally transmitted) or somatic excisions can be detected. Here we describe the use of HY2, a gene that codes for an enzyme involved in the biosynthesis of the phytochrome chromophore, to monitor the excision of a Ds gene-trap element in Arabidopsis thaliana. Taking advantage of the altered germination and de-etiolation behaviour of a Ds -tagged hy2 mutant, we have designed an efficient protocol for the recovery of germinal revertants, making HY2 the most precocious excision marker available, to the best of our knowledge. In addition, HY2 is also useful for generating visible sectors in photosynthetic tissues, thanks to the somatic instability of this mutable hy2 allele.

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Year:  2003        PMID: 12905069     DOI: 10.1007/s00438-003-0867-6

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  32 in total

1.  Analysis of flanking sequences from dissociation insertion lines: a database for reverse genetics in Arabidopsis.

Authors:  S Parinov; M Sevugan; D Ye; W C Yang; M Kumaran; V Sundaresan
Journal:  Plant Cell       Date:  1999-12       Impact factor: 11.277

Review 2.  Phytochromes and light signal perception by plants--an emerging synthesis.

Authors:  H Smith
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

3.  ACAULIS5, an Arabidopsis gene required for stem elongation, encodes a spermine synthase.

Authors:  Y Hanzawa; T Takahashi; A J Michael; D Burtin; D Long; M Pineiro; G Coupland; Y Komeda
Journal:  EMBO J       Date:  2000-08-15       Impact factor: 11.598

4.  Structural requirement of bilin chromophore for the photosensory specificity of phytochromes A and B.

Authors:  Hiroko Hanzawa; Tomoko Shinomura; Katsuhiko Inomata; Takashi Kakiuchi; Hideki Kinoshita; Keishiro Wada; Masaki Furuya
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

5.  Characterization of the transposition pattern of the Ac element in Arabidopsis thaliana using endonuclease I-SceI.

Authors:  C Machida; H Onouchi; J Koizumi; S Hamada; E Semiarti; S Torikai; Y Machida
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-05       Impact factor: 11.205

6.  Functional genomic analysis of the HY2 family of ferredoxin-dependent bilin reductases from oxygenic photosynthetic organisms.

Authors:  N Frankenberg; K Mukougawa; T Kohchi; J C Lagarias
Journal:  Plant Cell       Date:  2001-04       Impact factor: 11.277

7.  Cytosine deaminase as a negative selective marker for Arabidopsis.

Authors:  R J Perera; C G Linard; E R Signer
Journal:  Plant Mol Biol       Date:  1993-11       Impact factor: 4.076

8.  Different Roles for Phytochrome in Etiolated and Green Plants Deduced from Characterization of Arabidopsis thaliana Mutants.

Authors:  J. Chory; C. A. Peto; M. Ashbaugh; R. Saganich; L. Pratt; F. Ausubel
Journal:  Plant Cell       Date:  1989-09       Impact factor: 11.277

9.  Novel GUS expression patterns following transposition of an enhancer trap Ds element in Arabidopsis.

Authors:  V I Klimyuk; L Nussaume; K Harrison; J D Jones
Journal:  Mol Gen Genet       Date:  1995-12-10

10.  A two-element Enhancer-Inhibitor transposon system in Arabidopsis thaliana.

Authors:  M G Aarts; P Corzaan; W J Stiekema; A Pereira
Journal:  Mol Gen Genet       Date:  1995-06-10
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  2 in total

1.  The two Arabidopsis RPS6 genes, encoding for cytoplasmic ribosomal proteins S6, are functionally equivalent.

Authors:  Audrey Creff; Rodnay Sormani; Thierry Desnos
Journal:  Plant Mol Biol       Date:  2010-05-01       Impact factor: 4.076

2.  Targeted Ds-tagging strategy generates high allelic diversity at the Arabidopsis HY2 locus.

Authors:  Audrey Creff; Bénédicte Léonard; Thierry Desnos
Journal:  Plant Mol Biol       Date:  2006-07       Impact factor: 4.076

  2 in total

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