Literature DB >> 12888508

Double-stranded RNA-mediated gene silencing in fission yeast.

Mitch Raponi1, Greg M Arndt.   

Abstract

Double-stranded RNA (dsRNA) can specifically inhibit gene expression in a variety of organisms by invoking post-transcriptional degradation of homologous mRNA. Here we show that dsRNA-mediated gene regulation also occurs in the fission yeast Schizosaccharomyces pombe. We present evidence that: (i) reporter gene silencing is significantly enhanced when additional non-coding sense RNA is co-expressed with antisense RNA; (ii) expression of a panhandle RNA also silences target gene expression; (iii) expression of dsRNA is associated with siRNAs; (iv) a novel host-encoded factor which enhances antisense RNA gene silencing also enhances panhandle RNA-mediated gene inhibition. Both the exogenously introduced lacZ and c-myc genes are shown to be susceptible to dsRNA- mediated gene silencing in this model. Taken together, these data indicate that RNA-mediated gene silencing can occur through a RNAi-like mechanism in fission yeast.

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Year:  2003        PMID: 12888508      PMCID: PMC169874          DOI: 10.1093/nar/gkg484

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  43 in total

1.  Double-stranded RNA induces specific developmental defects in zebrafish embryos.

Authors:  A Wargelius; S Ellingsen; A Fjose
Journal:  Biochem Biophys Res Commun       Date:  1999-09-16       Impact factor: 3.575

Review 2.  RNA-triggered gene silencing.

Authors:  A Fire
Journal:  Trends Genet       Date:  1999-09       Impact factor: 11.639

Review 3.  Homology-dependent gene silencing in plants and fungi: a number of variations on the same theme.

Authors:  C Cogoni; G Macino
Journal:  Curr Opin Microbiol       Date:  1999-12       Impact factor: 7.934

4.  Genetic interference in Trypanosoma brucei by heritable and inducible double-stranded RNA.

Authors:  H Shi; A Djikeng; T Mark; E Wirtz; C Tschudi; E Ullu
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

Review 5.  RNA-mediated gene silencing in non-pathogenic and pathogenic fungi.

Authors:  Marianne D De Backer; Mitch Raponi; Greg M Arndt
Journal:  Curr Opin Microbiol       Date:  2002-06       Impact factor: 7.934

6.  High efficiency transformation of Schizosaccharomyces pombe by electroporation.

Authors:  H L Prentice
Journal:  Nucleic Acids Res       Date:  1992-02-11       Impact factor: 16.971

7.  Homology-dependent gene silencing in Paramecium.

Authors:  F Ruiz; L Vayssié; C Klotz; L Sperling; L Madeddu
Journal:  Mol Biol Cell       Date:  1998-04       Impact factor: 4.138

8.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

9.  The influence of antisense gene location on target gene suppression in the fission yeast Schizosaccharomyces pombe.

Authors:  M Raponi; D Atkins; I W Dawes; G M Arndt
Journal:  Antisense Nucleic Acid Drug Dev       Date:  2000-02

10.  Targeted disruption of gene function in Drosophila by RNA interference (RNA-i): a role for nautilus in embryonic somatic muscle formation.

Authors:  L Misquitta; B M Paterson
Journal:  Proc Natl Acad Sci U S A       Date:  1999-02-16       Impact factor: 11.205

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  16 in total

Review 1.  RNA interference: biology, mechanism, and applications.

Authors:  Neema Agrawal; P V N Dasaradhi; Asif Mohmmed; Pawan Malhotra; Raj K Bhatnagar; Sunil K Mukherjee
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

2.  Improvement of the fatty acid composition of an oil-producing filamentous fungus, Mortierella alpina 1S-4, through RNA interference with delta12-desaturase gene expression.

Authors:  Seiki Takeno; Eiji Sakuradani; Akiko Tomi; Misa Inohara-Ochiai; Hiroshi Kawashima; Toshihiko Ashikari; Sakayu Shimizu
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

Review 3.  The contradictory definitions of heterochromatin: transcription and silencing.

Authors:  Kathryn L Huisinga; Brent Brower-Toland; Sarah C R Elgin
Journal:  Chromosoma       Date:  2006-02-28       Impact factor: 4.316

4.  RNA interference with special reference to combating viruses of crustacea.

Authors:  Kathy La Fauce; Leigh Owens
Journal:  Indian J Virol       Date:  2012-08-14

5.  Analysis of small RNA in fission yeast; centromeric siRNAs are potentially generated through a structured RNA.

Authors:  Ingela Djupedal; Isabelle C Kos-Braun; Rebecca A Mosher; Niklas Söderholm; Femke Simmer; Thomas J Hardcastle; Aurélie Fender; Nadja Heidrich; Alexander Kagansky; Elizabeth Bayne; E Gerhart H Wagner; David C Baulcombe; Robin C Allshire; Karl Ekwall
Journal:  EMBO J       Date:  2009-12-16       Impact factor: 11.598

6.  Armoring CRAds with p21/Waf-1 shRNAs: the next generation of oncolytic adenoviruses.

Authors:  N Höti; W H Chowdhury; S Mustafa; J Ribas; M Castanares; T Johnson; M Liu; S E Lupold; R Rodriguez
Journal:  Cancer Gene Ther       Date:  2010-05-07       Impact factor: 5.987

7.  Hairpin dsRNA does not trigger RNA interference in Candida albicans cells.

Authors:  Janet F Staab; Theodore C White; Kieren A Marr
Journal:  Yeast       Date:  2010-08-24       Impact factor: 3.239

8.  Targeted gene silencing in the model mushroom Coprinopsis cinerea (Coprinus cinereus) by expression of homologous hairpin RNAs.

Authors:  Martin A Wälti; Cristina Villalba; Reto M Buser; Anke Grünler; Markus Aebi; Markus Künzler
Journal:  Eukaryot Cell       Date:  2006-04

9.  Inhibition of pds gene expression via the RNA interference approach in Dunaliella salina (Chlorophyta).

Authors:  Guohua Sun; Xuecheng Zhang; Zhenghong Sui; Yunxiang Mao
Journal:  Mar Biotechnol (NY)       Date:  2008-01-17       Impact factor: 3.619

10.  A single Argonaute protein mediates both transcriptional and posttranscriptional silencing in Schizosaccharomyces pombe.

Authors:  Alla Sigova; Nicholas Rhind; Phillip D Zamore
Journal:  Genes Dev       Date:  2004-09-15       Impact factor: 11.361

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