Literature DB >> 12884004

Exon skipping caused by an intronic insertion of a young Alu Yb9 element leads to severe hemophilia A.

Arupa Ganguly1, Tanya Dunbar, Peiqin Chen, Lynn Godmilow, Tapan Ganguly.   

Abstract

Short interspersed elements, such as Alu elements, have propagated to more than one million copies in the human genome. They affect the genome in several ways, caused by retrotransposition, recombination between elements, gene conversion, and alterations in gene expression. These events, including novel insertions into active genes, have been associated with a number of human disorders. Hemophilia A is an X-linked severe bleeding disorder and is caused by mutations in the Factor VIII gene. The spectrum of mutations includes point mutations, rearrangements, insertions, and deletions. Recently, an Alu retrotransposition event in a coding exon has been reported in a family with a severe form of hemophilia A. This was the first report of an Alu insertion in the Factor VIII gene. Here, we report a second Alu insertion event that lies in an intron of the same gene that causes exon skipping and the complete disruption of gene expression.

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Year:  2003        PMID: 12884004     DOI: 10.1007/s00439-003-0986-5

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  24 in total

1.  Alu insertion polymorphisms for the study of human genomic diversity.

Authors:  A M Roy-Engel; M L Carroll; E Vogel; R K Garber; S V Nguyen; A H Salem; M A Batzer; P L Deininger
Journal:  Genetics       Date:  2001-09       Impact factor: 4.562

Review 2.  Effects of Alu insertions on gene function.

Authors:  M N Szmulewicz; G E Novick; R J Herrera
Journal:  Electrophoresis       Date:  1998-06       Impact factor: 3.535

3.  Integration of retroposable elements in mammals: selection of target sites.

Authors:  J Jurka; P Klonowski
Journal:  J Mol Evol       Date:  1996-12       Impact factor: 2.395

4.  A new subfamily of recently retroposed human Alu repeats.

Authors:  J Jurka
Journal:  Nucleic Acids Res       Date:  1993-05-11       Impact factor: 16.971

5.  Factor VIII gene inversions in severe hemophilia A: results of an international consortium study.

Authors:  S E Antonarakis; J P Rossiter; M Young; J Horst; P de Moerloose; S S Sommer; R P Ketterling; H H Kazazian; C Négrier; C Vinciguerra; J Gitschier; M Goossens; E Girodon; N Ghanem; F Plassa; J M Lavergne; M Vidaud; J M Costa; Y Laurian; S W Lin; S R Lin; M C Shen; D Lillicrap; S A Taylor; S Windsor; S V Valleix; K Nafa; Y Sultan; M Delpech; C L Vnencak-Jones; J A Phillips; R C Ljung; E Koumbarelis; A Gialeraki; T Mandalaki; P V Jenkins; P W Collins; K J Pasi; A Goodeve; I Peake; F E Preston; M Schwartz; E Scheibel; J Ingerslev; D N Cooper; D S Millar; V V Kakkar; F Giannelli; J A Naylor; E F Tizzano; M Baiget; M Domenech; C Altisent; J Tusell; M Beneyto; J I Lorenzo; C Gaucher; C Mazurier; K Peerlinck; G Matthijs; J J Cassiman; J Vermylen; P G Mori; M Acquila; D Caprino; H Inaba
Journal:  Blood       Date:  1995-09-15       Impact factor: 22.113

6.  A de novo Alu insertion results in neurofibromatosis type 1.

Authors:  M R Wallace; L B Andersen; A M Saulino; P E Gregory; T W Glover; F S Collins
Journal:  Nature       Date:  1991-10-31       Impact factor: 49.962

7.  Two mutations remote from an exon/intron junction in the beta-hexosaminidase beta-subunit gene affect 3'-splice site selection and cause Sandhoff disease.

Authors:  M Fujimaru; A Tanaka; K Choeh; N Wakamatsu; H Sakuraba; G Isshiki
Journal:  Hum Genet       Date:  1998-10       Impact factor: 4.132

8.  Multiplex analysis of two intragenic microsatellite repeat polymorphisms in the genetic diagnosis of haemophilia A.

Authors:  S Windsor; S A Taylor; D Lillicrap
Journal:  Br J Haematol       Date:  1994-04       Impact factor: 6.998

Review 9.  Mobile genetic element activation and genotoxic cancer therapy: potential clinical implications.

Authors:  Christy R Hagan; Charles M Rudin
Journal:  Am J Pharmacogenomics       Date:  2002

10.  Active Alu element "A-tails": size does matter.

Authors:  Astrid M Roy-Engel; Abdel-Halim Salem; Oluwatosin O Oyeniran; Lisa Deininger; Dale J Hedges; Gail E Kilroy; Mark A Batzer; Prescott L Deininger
Journal:  Genome Res       Date:  2002-09       Impact factor: 9.043

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  33 in total

1.  Natural variation in ARF18 gene simultaneously affects seed weight and silique length in polyploid rapeseed.

Authors:  Jing Liu; Wei Hua; Zhiyong Hu; Hongli Yang; Liang Zhang; Rongjun Li; Linbin Deng; Xingchao Sun; Xinfa Wang; Hanzhong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-31       Impact factor: 11.205

2.  Whole genome computational comparative genomics: A fruitful approach for ascertaining Alu insertion polymorphisms.

Authors:  Jianxin Wang; Lei Song; M Katherine Gonder; Sami Azrak; David A Ray; Mark A Batzer; Sarah A Tishkoff; Ping Liang
Journal:  Gene       Date:  2006-01-10       Impact factor: 3.688

3.  Roles of retrotransposons in benign and malignant hematologic disease.

Authors:  Anna M Schneider; Amy S Duffield; David E Symer; Kathleen H Burns
Journal:  Cellscience       Date:  2009-10-27

4.  Structural variants caused by Alu insertions are associated with risks for many human diseases.

Authors:  Lindsay M Payer; Jared P Steranka; Wan Rou Yang; Maria Kryatova; Sibyl Medabalimi; Daniel Ardeljan; Chunhong Liu; Jef D Boeke; Dimitri Avramopoulos; Kathleen H Burns
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-02       Impact factor: 11.205

Review 5.  Beyond mRNA: The role of non-coding RNAs in normal and aberrant hematopoiesis.

Authors:  Mark C Wilkes; Claire E Repellin; Kathleen M Sakamoto
Journal:  Mol Genet Metab       Date:  2017-07-25       Impact factor: 4.797

6.  The Alu insertion in the CLCN5 gene of a patient with Dent's disease leads to exon 11 skipping.

Authors:  Félix Claverie-Martín; Carlos Flores; Montserrat Antón-Gamero; Hilaria González-Acosta; Víctor García-Nieto
Journal:  J Hum Genet       Date:  2005-07-23       Impact factor: 3.172

7.  Short interspersed elements (SINEs) are a major source of canine genomic diversity.

Authors:  Wei Wang; Ewen F Kirkness
Journal:  Genome Res       Date:  2005-12       Impact factor: 9.043

8.  AluGene: a database of Alu elements incorporated within protein-coding genes.

Authors:  Tal Dagan; Rotem Sorek; Eilon Sharon; Gil Ast; Dan Graur
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

9.  Circular RNAs are abundant, conserved, and associated with ALU repeats.

Authors:  William R Jeck; Jessica A Sorrentino; Kai Wang; Michael K Slevin; Christin E Burd; Jinze Liu; William F Marzluff; Norman E Sharpless
Journal:  RNA       Date:  2012-12-18       Impact factor: 4.942

10.  Alu-element insertion in an OPA1 intron sequence associated with autosomal dominant optic atrophy.

Authors:  Gian Nicola Gallus; Elena Cardaioli; Alessandra Rufa; Paola Da Pozzo; Silvia Bianchi; Camilla D'Eramo; Michele Collura; Manuela Tumino; Lorenzo Pavone; Antonio Federico
Journal:  Mol Vis       Date:  2010-02-10       Impact factor: 2.367

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