Literature DB >> 20200603

Roles of retrotransposons in benign and malignant hematologic disease.

Anna M Schneider1, Amy S Duffield, David E Symer, Kathleen H Burns.   

Abstract

Nearly half of our genomes are repetitive sequences derived from retrotransposons. These repeats have accumulated by a 'copy-and-paste' mechanism whereby: (i.) a genomic template sequence is transcribed to RNA, (ii.) the RNA is reverse-transcribed, and (iii.) the DNA copy is inserted at a new location in the host genome. As we remain susceptible to new retrotransposition events, many of these insertions are highly polymorphic. Transposons are of interest since insertions into both coding and non-coding gene regions have been associated with a wide variety of functional sequelae and because transposable elements can be involved in genomic rearrangements in transformed cells. In this review, we highlight how expression of retrotransposons, de novo and polymorphic transposon insertions, and genomic rearrangements that these repeats potentiate contribute to both benign and neoplastic hematopoietic diseases.

Entities:  

Year:  2009        PMID: 20200603      PMCID: PMC2830787     

Source DB:  PubMed          Journal:  Cellscience        ISSN: 1742-8130


  101 in total

1.  Transposition of hAT elements links transposable elements and V(D)J recombination.

Authors:  Liqin Zhou; Rupak Mitra; Peter W Atkinson; Alison Burgess Hickman; Fred Dyda; Nancy L Craig
Journal:  Nature       Date:  2004-12-23       Impact factor: 49.962

2.  Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition.

Authors:  Q Feng; J V Moran; H H Kazazian; J D Boeke
Journal:  Cell       Date:  1996-11-29       Impact factor: 41.582

3.  Human L1 element target-primed reverse transcription in vitro.

Authors:  Gregory J Cost; Qinghua Feng; Alain Jacquier; Jef D Boeke
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

4.  Severe hemophilia A due to a 1.3 kb factor VIII gene deletion including exon 24: homologous recombination between 41 bp within an Alu repeat sequence in introns 23 and 24.

Authors:  S M Nakaya; T-C Hsu; S J Geraghty; M J Manco-Johnson; A R Thompson
Journal:  J Thromb Haemost       Date:  2004-11       Impact factor: 5.824

5.  Identification of complex genomic breakpoint junctions in the t(9;11) MLL-AF9 fusion gene in acute leukemia.

Authors:  H G Super; P L Strissel; O M Sobulo; D Burian; S C Reshmi; B Roe; N J Zeleznik-Le; M O Diaz; J D Rowley
Journal:  Genes Chromosomes Cancer       Date:  1997-10       Impact factor: 5.006

6.  Cellular DNA region involved in induction of thymic lymphomas (Mlvi-2) maps to mouse chromosome 15.

Authors:  P N Tsichlis; P G Strauss; C A Kozak
Journal:  Mol Cell Biol       Date:  1984-05       Impact factor: 4.272

Review 7.  DNA methyltransferase and histone deacetylase inhibitors in the treatment of myelodysplastic syndromes.

Authors:  Elizabeth A Griffiths; Steven D Gore
Journal:  Semin Hematol       Date:  2008-01       Impact factor: 3.851

Review 8.  Mobile genetic element activation and genotoxic cancer therapy: potential clinical implications.

Authors:  Christy R Hagan; Charles M Rudin
Journal:  Am J Pharmacogenomics       Date:  2002

Review 9.  Insertional polymorphisms: a new lease of life for endogenous retroviruses in human disease.

Authors:  David Moyes; David J Griffiths; Patrick J Venables
Journal:  Trends Genet       Date:  2007-05-23       Impact factor: 11.639

10.  Mechanisms for human genomic rearrangements.

Authors:  Wenli Gu; Feng Zhang; James R Lupski
Journal:  Pathogenetics       Date:  2008-11-03
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  4 in total

1.  Evidence for the persistence of an active endogenous retrovirus (ERVE) in humans.

Authors:  Horacio Naveira; Xabier Bello; José Luis Abal-Fabeiro; Xulio Maside
Journal:  Genetica       Date:  2014-09-06       Impact factor: 1.082

2.  The cancer-associated CTCFL/BORIS protein targets multiple classes of genomic repeats, with a distinct binding and functional preference for humanoid-specific SVA transposable elements.

Authors:  Elena M Pugacheva; Evgeny Teplyakov; Qiongfang Wu; Jingjing Li; Cheng Chen; Chengcheng Meng; Jian Liu; Susan Robinson; Dmitry Loukinov; Abdelhalim Boukaba; Andrew Paul Hutchins; Victor Lobanenkov; Alexander Strunnikov
Journal:  Epigenetics Chromatin       Date:  2016-08-31       Impact factor: 4.954

3.  Fuel source shift or cost reduction: Context-dependent adaptation strategies in closely related Neodon fuscus and Lasiopodomys brandtii against hypoxia.

Authors:  Xiu-Juan Li; Cong-Cong Qiao; Bo-Jian Chen; Meng-Yang Li; Peng Chen; Mao-Lin Huang; Chun-Xiao Chen; Yan Liu; Han Cheng; Meng-Wan Jiang; Lu-Ye Shi; Zhen-Long Wang
Journal:  Zool Res       Date:  2022-07-18

4.  Inter-Strain Differences in LINE-1 DNA Methylation in the Mouse Hematopoietic System in Response to Exposure to Ionizing Radiation.

Authors:  Isabelle R Miousse; Jianhui Chang; Lijian Shao; Rupak Pathak; Étienne Nzabarushimana; Kristy R Kutanzi; Reid D Landes; Alan J Tackett; Martin Hauer-Jensen; Daohong Zhou; Igor Koturbash
Journal:  Int J Mol Sci       Date:  2017-07-04       Impact factor: 5.923

  4 in total

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