Literature DB >> 12876348

Structure of xylanase Xys1delta from Streptomyces halstedii.

Albert Canals1, M Cristina Vega, F Xavier Gomis-Rüth, Margarita Díaz, Ram óN I Santamaría R, Miquel Coll.   

Abstract

Xylanases hydrolyze the beta-1,4-linked xylose backbone of xylans. They are of increasing interest in the paper and food industries for their pre-bleaching and bio-pulping applications. Such industries demand new xylanases to cover a wider range of cleavage specificity, activity and stability. The catalytic domain of xylanase Xys1 from Streptomyces halstedii JM8 was expressed, purified and crystallized and native data were collected to 1.78 A resolution with an R(merge) of 4.4%. The crystals belong to space group P2(1)2(1)2(1), with unit-cell parameters a = 34.05, b = 79.60, c = 87.80 A. The structure was solved by the molecular-replacement method using the structure of the homologue Xyl10A from Streptomyces lividans. In a similar manner to other members of its family, Xys1 folds to form a standard (beta/alpha)(8) barrel with the two catalytic functions, the acid/base and the nucleophile, at its C-terminal side. The overall structure is described and compared with those of related xylanases.

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Year:  2003        PMID: 12876348     DOI: 10.1107/s0907444903012629

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  7 in total

1.  Post-translational processing of modular xylanases from Streptomyces is dependent on the carbohydrate-binding module.

Authors:  Margarita Díaz; José M Fernández-Ábalos; Juan Soliveri; José L Copa-Patiño; Ramón I Santamaría
Journal:  J Ind Microbiol Biotechnol       Date:  2010-12-23       Impact factor: 3.346

2.  Crystal structures of native and xylosaccharide-bound alkali thermostable xylanase from an alkalophilic Bacillus sp. NG-27: structural insights into alkalophilicity and implications for adaptation to polyextreme conditions.

Authors:  Karuppasamy Manikandan; Amit Bhardwaj; Naveen Gupta; Neratur K Lokanath; Amit Ghosh; Vanga Siva Reddy; Suryanarayanarao Ramakumar
Journal:  Protein Sci       Date:  2006-07-05       Impact factor: 6.725

3.  Purification, crystallization and crystallographic analysis of Clostridium thermocellum endo-1,4-beta-D-xylanase 10B in complex with xylohexaose.

Authors:  Shabir Najmudin; Benedita A Pinheiro; Maria J Romão; José A M Prates; Carlos M G A Fontes
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-07-05

4.  Crystallization and preliminary X-ray study of a family 10 alkali-thermostable xylanase from alkalophilic Bacillus sp. strain NG-27.

Authors:  K Manikandan; Amit Bhardwaj; Amit Ghosh; V S Reddy; S Ramakumar
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-07-08

5.  Characterization of an endo-processive-type xyloglucanase having a β-1,4-glucan-binding module and an endo-type xyloglucanase from Streptomyces avermitilis.

Authors:  Hitomi Ichinose; Yuko Araki; Mari Michikawa; Koichi Harazono; Katsuro Yaoi; Shuichi Karita; Satoshi Kaneko
Journal:  Appl Environ Microbiol       Date:  2012-08-31       Impact factor: 4.792

6.  Structural and functional characterization of a highly stable endo-β-1,4-xylanase from Fusarium oxysporum and its development as an efficient immobilized biocatalyst.

Authors:  Sara Gómez; Asia M Payne; Martin Savko; Gavin C Fox; William E Shepard; Francisco J Fernandez; M Cristina Vega
Journal:  Biotechnol Biofuels       Date:  2016-09-05       Impact factor: 6.040

Review 7.  Structural Considerations on the Use of Endo-Xylanases for the Production of prebiotic Xylooligosaccharides from Biomass.

Authors:  Javier A Linares-Pasten; Anna Aronsson; Eva Nordberg Karlsson
Journal:  Curr Protein Pept Sci       Date:  2018       Impact factor: 3.272

  7 in total

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