Literature DB >> 12875815

Gene-sequence-based criteria for species definition in bacteriology: the Bartonella paradigm.

Bernard La Scola1, Zaher Zeaiter, Atieh Khamis, Didier Raoult.   

Abstract

The definition of new species is currently based on polyphasic classification that includes both determination of phenotypic characteristics and DNA-DNA homology. However, none of these techniques is convenient for the rapid characterization of fastidious or non-culturable bacteria. Using sequences available in the GenBank database, we compared the similarities of gene fragments among the currently recognized Bartonella species. This comparison led to both the definition of similarity values that discriminated Bartonella at the species level and assessment of the relative discriminatory power of each gene examined. In this perspective, rpoB and gltA were found to be the most potent.

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Year:  2003        PMID： 12875815     DOI： 10.1016/s0966-842x(03)00143-4

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN： 0966-842X            Impact factor:   17.079


  103 in total

1.  Corynebacterium species isolated from bone and joint infections identified by 16S rRNA gene sequence analysis.

Authors:  Véronique Roux; Michel Drancourt; Andreas Stein; Philippe Riegel; Didier Raoult; Bernard La Scola
Journal:  J Clin Microbiol       Date:  2004-05       Impact factor: 5.948

2.  Interaction between protein subunits of the type IV secretion system of Bartonella henselae.

Authors:  Alireza Shamaei-Tousi; Rachel Cahill; Gad Frankel
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

3.  rpoB gene sequencing for identification of Corynebacterium species.

Authors:  Atieh Khamis; Didier Raoult; Bernard La Scola
Journal:  J Clin Microbiol       Date:  2004-09       Impact factor: 5.948

4.  Genetic Diversity of Bartonella spp. in Wild Mammals and Ectoparasites in Brazilian Pantanal.

Authors:  Keyla Carstens Marques de Sousa; Renan Bressianini do Amaral; Heitor Miraglia Herrera; Filipe Martins Santos; Gabriel Carvalho Macedo; Pedro Cordeiro Estrela de Andrade Pinto; Darci Moraes Barros-Battesti; Rosangela Zacarias Machado; Marcos Rogério André
Journal:  Microb Ecol       Date:  2018-01-08       Impact factor: 4.552

5.  Potential limitations of the 16S-23S rRNA intergenic region for molecular detection of Bartonella species.

Authors:  Ricardo G Maggi; Edward B Breitschwerdt
Journal:  J Clin Microbiol       Date:  2005-03       Impact factor: 5.948

6.  Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium.

Authors:  Atieh Khamis; Didier Raoult; Bernard La Scola
Journal:  J Clin Microbiol       Date:  2005-04       Impact factor: 5.948

7.  Inferring the evolutionary history of vibrios by means of multilocus sequence analysis.

Authors:  Tomoo Sawabe; Kumiko Kita-Tsukamoto; Fabiano L Thompson
Journal:  J Bacteriol       Date:  2007-08-17       Impact factor: 3.490

8.  Identification of Bartonellae in the soft tick species Ornithodoros sonrai in Senegal.

Authors:  Oleg Mediannikov; Georges Diatta; Kangaji Kasongo; Didier Raoult
Journal:  Vector Borne Zoonotic Dis       Date:  2013-12-20       Impact factor: 2.133

9.  Bartonella Infection in Hematophagous, Insectivorous, and Phytophagous Bat Populations of Central Mexico and the Yucatan Peninsula.

Authors:  Matthew J Stuckey; Bruno B Chomel; Guillermo Galvez-Romero; José Ignacio Olave-Leyva; Cirani Obregón-Morales; Hayde Moreno-Sandoval; Nidia Aréchiga-Ceballos; Mónica Salas-Rojas; Alvaro Aguilar-Setién
Journal:  Am J Trop Med Hyg       Date:  2017-07-19       Impact factor: 2.345

10.  Isolation of Bartonella rattimassiliensis sp. nov. and Bartonella phoceensis sp. nov. from European Rattus norvegicus.

Authors:  Vijay A K B Gundi; Bernard Davoust; Atieh Khamis; Mickaël Boni; Didier Raoult; Bernard La Scola
Journal:  J Clin Microbiol       Date:  2004-08       Impact factor: 5.948
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