Literature DB >> 15815024

Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium.

Atieh Khamis1, Didier Raoult, Bernard La Scola.   

Abstract

Higher proportions (91%) of 168 corynebacterial isolates were positively identified by partial rpoB gene determination than by that based on 16S rRNA gene sequences. This method is thus a simple, molecular-analysis-based method for identification of corynebacteria, but it should be used in conjunction with other tests for definitive identification.

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Year:  2005        PMID： 15815024      PMCID： PMC1081344          DOI： 10.1128/JCM.43.4.1934-1936.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  11 in total

1.  Usefulness of rpoB gene sequencing for identification of Afipia and Bosea species, including a strategy for choosing discriminative partial sequences.

Authors:  Atieh Khamis; Philippe Colson; Didier Raoult; Bernard La Scola
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792

Review 2.  Gene-sequence-based criteria for species definition in bacteriology: the Bartonella paradigm.

Authors:  Bernard La Scola; Zaher Zeaiter; Atieh Khamis; Didier Raoult
Journal:  Trends Microbiol       Date:  2003-07       Impact factor: 17.079

3.  rpoB gene sequencing for identification of Corynebacterium species.

Authors:  Atieh Khamis; Didier Raoult; Bernard La Scola
Journal:  J Clin Microbiol       Date:  2004-09       Impact factor: 5.948

4.  Phylogeny of the genus Corynebacterium deduced from analyses of small-subunit ribosomal DNA sequences.

Authors:  R Ruimy; P Riegel; P Boiron; H Monteil; R Christen
Journal:  Int J Syst Bacteriol       Date:  1995-10

Review 5.  Clinical microbiology of coryneform bacteria.

Authors:  G Funke; A von Graevenitz; J E Clarridge; K A Bernard
Journal:  Clin Microbiol Rev       Date:  1997-01       Impact factor: 26.132

6.  Phylogenetic analysis of the genus Corynebacterium based on 16S rRNA gene sequences.

Authors:  C Pascual; P A Lawson; J A Farrow; M N Gimenez; M D Collins
Journal:  Int J Syst Bacteriol       Date:  1995-10

7.  Corynebacterium aurimucosum sp. nov. and emended description of Corynebacterium minutissimum Collins and Jones (1983).

Authors:  A F Yassin; U Steiner; W Ludwig
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

8.  Identification of some charcoal-black-pigmented CDC fermentative coryneform group 4 isolates as Rothia dentocariosa and some as Corynebacterium aurimucosum: proposal of Rothia dentocariosa emend. Georg and Brown 1967, Corynebacterium aurimucosum emend. Yassin et al. 2002, and Corynebacterium nigricans Shukla et al. 2003 pro synon. Corynebacterium aurimucosum.

Authors:  Maryam I Daneshvar; Dannie G Hollis; Robbin S Weyant; Jean G Jordan; John P MacGregor; Roger E Morey; Anne M Whitney; Don J Brenner; Arnold G Steigerwalt; Leta O Helsel; Patti M Raney; Jean B Patel; Paul N Levett; June M Brown
Journal:  J Clin Microbiol       Date:  2004-09       Impact factor: 5.948

9.  Genomic diversity among Corynebacterium jeikeium strains and comparison with biochemical characteristics and antimicrobial susceptibilities.

Authors:  P Riegel; D de Briel; G Prévost; F Jehl; H Monteil
Journal:  J Clin Microbiol       Date:  1994-08       Impact factor: 5.948

10.  Corynebacterium nigricans sp. nov.: proposed name for a black-pigmented Corynebacterium species recovered from the human female urogenital tract.

Authors:  Sanjay K Shukla; Kathryn A Bernard; Mary Harney; Daniel N Frank; Kurt D Reed
Journal:  J Clin Microbiol       Date:  2003-09       Impact factor: 5.948
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  56 in total

1.  Identification of non-diphtheriae corynebacterium by use of matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Adnan A Alatoom; Charles J Cazanave; Scott A Cunningham; Sherry M Ihde; Robin Patel
Journal:  J Clin Microbiol       Date:  2011-11-09       Impact factor: 5.948

2.  Characterization of Corynebacterium species in macaques.

Authors:  Jaime Venezia; Pamela K Cassiday; Robert P Marini; Zeli Shen; Ellen M Buckley; Yaicha Peters; Nancy Taylor; Floyd E Dewhirst; Maria L Tondella; James G Fox
Journal:  J Med Microbiol       Date:  2012-06-21       Impact factor: 2.472

3.  Identification of clinical coryneform bacterial isolates: comparison of biochemical methods and sequence analysis of 16S rRNA and rpoB genes.

Authors:  Elisabeth E Adderson; Jan W Boudreaux; Jessica R Cummings; Stanley Pounds; Deborah A Wilson; Gary W Procop; Randall T Hayden
Journal:  J Clin Microbiol       Date:  2007-12-26       Impact factor: 5.948

4.  The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota.

Authors:  Jean-Christophe Lagier; Perrine Hugon; Saber Khelaifia; Pierre-Edouard Fournier; Bernard La Scola; Didier Raoult
Journal:  Clin Microbiol Rev       Date:  2015-01       Impact factor: 26.132

5.  Identification of rare pathogenic bacteria in a clinical microbiology laboratory: impact of matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Piseth Seng; Cedric Abat; Jean Marc Rolain; Philippe Colson; Jean-Christophe Lagier; Frédérique Gouriet; Pierre Edouard Fournier; Michel Drancourt; Bernard La Scola; Didier Raoult
Journal:  J Clin Microbiol       Date:  2013-05-01       Impact factor: 5.948

6.  Evaluation of the Bruker MALDI Biotyper for identification of Gram-positive rods: development of a diagnostic algorithm for the clinical laboratory.

Authors:  Bettina Schulthess; Guido V Bloemberg; Reinhard Zbinden; Erik C Böttger; Michael Hombach
Journal:  J Clin Microbiol       Date:  2014-01-22       Impact factor: 5.948

Review 7.  Performance and Application of 16S rRNA Gene Cycle Sequencing for Routine Identification of Bacteria in the Clinical Microbiology Laboratory.

Authors:  Deirdre L Church; Lorenzo Cerutti; Antoine Gürtler; Thomas Griener; Adrian Zelazny; Stefan Emler
Journal:  Clin Microbiol Rev       Date:  2020-09-09       Impact factor: 26.132

8.  Further characteristics of Arcanobacterium pinnipediorum DSM 28752T and Arcanobacterium wilhelmae DSM 102162T, two novel species of genus Arcanobacterium.

Authors:  Osama Sammra; Jörg Rau; Jörn Wickhorst; Mazen Alssahen; Abdulwahed Ahmed Hassan; Christoph Lämmler; Ellen Prenger-Berninghoff; Amir Abdulmawjood
Journal:  Folia Microbiol (Praha)       Date:  2018-05-13       Impact factor: 2.099

9.  Isolation of Corynebacterium ureicelerivorans from normally sterile sites in humans.

Authors:  M I Fernández-Natal; J A Sáez-Nieto; S Valdezate; R H Rodríguez-Pollán; S Lapeña; F Cachón; F Soriano
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2008-12-17       Impact factor: 3.267

10.  Pigs as source for toxigenic Corynebacterium ulcerans.

Authors:  Regina Schuhegger; Christoph Schoerner; Julia Dlugaiczyk; Ina Lichtenfeld; Alexander Trouillier; Veronique Zeller-Peronnet; Ulrich Busch; Anja Berger; Rudolf Kugler; Stefan Hörmansdorfer; Andreas Sing
Journal:  Emerg Infect Dis       Date:  2009-08       Impact factor: 6.883
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