Literature DB >> 12862460

Probing the structure and function of the Escherichia coli DNA alkylation repair AlkB protein through chemical cross-linking.

Yukiko Mishina1, Chuan He.   

Abstract

Engineering chemical cross-linking groups at the protein/DNA interface provide a powerful method for probing the putative active site and a damage searching mechanism of the Escherichia coli alkylation DNA repair protein AlkB.

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Year:  2003        PMID： 12862460     DOI： 10.1021/ja034636c

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN： 0002-7863            Impact factor:   15.419


  14 in total

1.  Direct repair of the exocyclic DNA adduct 1,N6-ethenoadenine by the DNA repair AlkB proteins.

Authors:  Yukiko Mishina; Cai-Guang Yang; Chuan He
Journal:  J Am Chem Soc       Date:  2005-10-26       Impact factor: 15.419

Review 2.  Direct reversal of DNA alkylation damage.

Authors:  Yukiko Mishina; Erica M Duguid; Chuan He
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

Review 3.  Oxidative dealkylation DNA repair mediated by the mononuclear non-heme iron AlkB proteins.

Authors:  Yukiko Mishina; Chuan He
Journal:  J Inorg Biochem       Date:  2006-02-15       Impact factor: 4.155

4.  Synthesis of guanosine and deoxyguanosine phosphoramidites with cross-linkable thioalkyl tethers for direct incorporation into RNA and DNA.

Authors:  Xiaorong Hou; Gang Wang; Barbara L Gaffney; Roger A Jones
Journal:  Nucleosides Nucleotides Nucleic Acids       Date:  2009-11       Impact factor: 1.381

Review 5.  DNA repair by reversal of DNA damage.

Authors:  Chengqi Yi; Chuan He
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-01-01       Impact factor: 10.005

6.  Preparation of DNA and RNA fragments containing guanine N(2)-thioalkyl tethers.

Authors:  Xiaorong Hou; Gang Wang; Barbara L Gaffney; Roger A Jones
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2010-06

7.  Interaction of human and bacterial AlkB proteins with DNA as probed through chemical cross-linking studies.

Authors:  Yukiko Mishina; Chih-Hui J Lee; Chuan He
Journal:  Nucleic Acids Res       Date:  2004-03-05       Impact factor: 16.971

8.  A non-heme iron-mediated chemical demethylation in DNA and RNA.

Authors:  Chengqi Yi; Cai-Guang Yang; Chuan He
Journal:  Acc Chem Res       Date:  2009-04-21       Impact factor: 22.384

9.  Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.

Authors:  Cai-Guang Yang; Chengqi Yi; Erica M Duguid; Christopher T Sullivan; Xing Jian; Phoebe A Rice; Chuan He
Journal:  Nature       Date:  2008-04-24       Impact factor: 49.962

10.  Oligonucleotide Bioconjugation with Bifunctional Palladium Reagents.

Authors:  Muhammad Jbara; Jacob Rodriguez; Heemal H Dhanjee; Andrei Loas; Stephen L Buchwald; Bradley L Pentelute
Journal:  Angew Chem Int Ed Engl       Date:  2021-04-16       Impact factor: 15.336
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