Literature DB >> 12861427

Simulations of NMR-detected diffusion in suspensions of red cells: the effects of variation in membrane permeability and observation time.

David G Regan1, Philip W Kuchel.   

Abstract

Monte Carlo random-walk simulations of diffusion in virtual lattices of cells have been used to study and characterize diffusion-coherence phenomena that arise when pulsed field-gradient spin-echo (PGSE) nuclear magnetic resonance (NMR) experiments are conducted on human red blood cell (RBC; erythrocytes) suspensions. These coherence effects are manifest as diffraction-like patterns when the normalized PGSE signal intensities are plotted as a function of the spatial wave vector q in so-called q-space plots. q-Space analysis is sensitive to small changes in cell morphology, cell size, membrane transport rates, hematocrit, and packing arrangement. In the present study we used simulations to predict the effect of varying the time over which diffusion is measured (the "observation time" or "diffusion time") and the permeability of the membrane on the form of q-space plots. Thus we predict that inhibiting water exchange across the human RBC membrane, such that the value of the permeability coefficient is reduced by approximately an order of magnitude below the normal physiological value, will effectively render the membrane impermeable on the timescale of the PGSE NMR experiment; further inhibition will therefore result in negligible reduction in the measured root-mean-square displacement (r.m.s.d.) of diffusing water as a function of the observation time. The work also underscores the importance of using an appropriate experimental observation time if q-space data are to be used to estimate compartment dimensions and interbarrier spacing, and illustrates an expeditious method for determining this value.

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Year:  2003        PMID: 12861427     DOI: 10.1007/s00249-003-0331-x

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  6 in total

1.  Mean residence time of molecules diffusing in a cell bounded by a semi-permeable membrane: Monte Carlo simulations and an expression relating membrane transition probability to permeability.

Authors:  D G Regan; P W Kuchel
Journal:  Eur Biophys J       Date:  2000       Impact factor: 1.733

2.  Assignment of coherence features in NMR q-space plots to particular diffusion modes in erythrocyte suspensions.

Authors:  A M Torres; A T Taurins; D G Regan; B E Chapman; P W Kuchel
Journal:  J Magn Reson       Date:  1999-05       Impact factor: 2.229

3.  Simulations of NMR-detected diffusion in suspensions of red cells: the "signatures" in q-space plots of various lattice arrangements.

Authors:  David G Regan; Philip W Kuchel
Journal:  Eur Biophys J       Date:  2002-11-12       Impact factor: 1.733

4.  Simulations of molecular diffusion in lattices of cells: insights for NMR of red blood cells.

Authors:  David G Regan; Philip W Kuchel
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

5.  Characterisation of erythrocyte shapes and sizes by NMR diffusion-diffraction of water: correlations with electron micrographs.

Authors:  A M Torres; R J Michniewicz; B E Chapman; G A Young; P W Kuchel
Journal:  Magn Reson Imaging       Date:  1998-05       Impact factor: 2.546

6.  NMR "diffusion-diffraction" of water revealing alignment of erythrocytes in a magnetic field and their dimensions and membrane transport characteristics.

Authors:  P W Kuchel; A Coy; P Stilbs
Journal:  Magn Reson Med       Date:  1997-05       Impact factor: 4.668

  6 in total
  7 in total

1.  NMR q-space analysis of canonical shapes of human erythrocytes: stomatocytes, discocytes, spherocytes and echinocytes.

Authors:  Timothy J Larkin; Guilhem Pages; Bogdan E Chapman; John E J Rasko; Philip W Kuchel
Journal:  Eur Biophys J       Date:  2012-05-29       Impact factor: 1.733

2.  The influence of a cellular size distribution on NMR diffusion measurements.

Authors:  Sune Nørhøj Jespersen; Michael Pedersen; Hans Stødkilde-Jørgensen
Journal:  Eur Biophys J       Date:  2005-05-11       Impact factor: 1.733

3.  Erythrocyte orientational and cell volume effects on NMR q-space analysis: simulations of restricted diffusion.

Authors:  Timothy J Larkin; Philip W Kuchel
Journal:  Eur Biophys J       Date:  2009-04-28       Impact factor: 1.733

4.  Distinct effects of nuclear volume fraction and cell diameter on high b-value diffusion MRI contrast in tumors.

Authors:  Nathan S White; Anders M Dale
Journal:  Magn Reson Med       Date:  2013-12-19       Impact factor: 4.668

5.  Effects of macromolecular crowding on intracellular diffusion from a single particle perspective.

Authors:  Damien Hall; Masaru Hoshino
Journal:  Biophys Rev       Date:  2010-02-06

6.  The effect of the diffusion time and pulse gradient duration ratio on the diffraction pattern and the structural information estimated from q-space diffusion MR: experiments and simulations.

Authors:  Amnon Bar-Shir; Liat Avram; Evren Ozarslan; Peter J Basser; Yoram Cohen
Journal:  J Magn Reson       Date:  2008-07-15       Impact factor: 2.229

7.  In vivo quantification of transvascular water exchange during the acute phase of permanent stroke.

Authors:  Y R Kim; E Tejima; S Huang; D N Atochin; G Dai; E H Lo; P L Huang; A Bogdanov; B R Rosen
Journal:  Magn Reson Med       Date:  2008-10       Impact factor: 4.668

  7 in total

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