Literature DB >> 12849784

Biotechnological prospects from metagenomics.

Patrick D Schloss1, Jo Handelsman.   

Abstract

The recognition that most microorganisms in the environment cannot be cultured by standard methods stimulated the development of metagenomics, which is the genomic analysis of uncultured microorganisms. Two types of analysis have been used to obtain information from metagenomic libraries: a function-driven approach, in which metagenomic libraries are initially screened for an expressed trait, and a sequence-driven approach, in which libraries are initially screened for particular DNA sequences. New antibiotics and enzymes are among the early discoveries from metagenomics. Future refinement of methods that enrich for genes of particular function will accelerate the rate of discovery of useful molecules.

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Year:  2003        PMID: 12849784     DOI: 10.1016/s0958-1669(03)00067-3

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  108 in total

1.  Characterization of biphenyl dioxygenase sequences and activities encoded by the metagenomes of highly polychlorobiphenyl-contaminated soils.

Authors:  Christine Standfuss-Gabisch; Djamila Al-Halbouni; Bernd Hofer
Journal:  Appl Environ Microbiol       Date:  2012-02-10       Impact factor: 4.792

2.  Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.

Authors:  Marc Weber; Hanno Teeling; Sixing Huang; Jost Waldmann; Mariette Kassabgy; Bernhard M Fuchs; Anna Klindworth; Christine Klockow; Antje Wichels; Gunnar Gerdts; Rudolf Amann; Frank Oliver Glöckner
Journal:  ISME J       Date:  2010-12-16       Impact factor: 10.302

3.  Size Does Matter: Application-driven Approaches for Soil Metagenomics.

Authors:  Kavita S Kakirde; Larissa C Parsley; Mark R Liles
Journal:  Soil Biol Biochem       Date:  2010-11-01       Impact factor: 7.609

4.  Microbial determinants of biochemical individuality and their impact on toxicology and pharmacology.

Authors:  Andrew D Patterson; Peter J Turnbaugh
Journal:  Cell Metab       Date:  2014-08-21       Impact factor: 27.287

5.  13C-carrier DNA shortens the incubation time needed to detect benzoate-utilizing denitrifying bacteria by stable-isotope probing.

Authors:  E Gallagher; L McGuinness; C Phelps; L Y Young; L J Kerkhof
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

Review 6.  Metagenomics: application of genomics to uncultured microorganisms.

Authors:  Jo Handelsman
Journal:  Microbiol Mol Biol Rev       Date:  2004-12       Impact factor: 11.056

7.  Construction, analysis, and beta-glucanase screening of a bacterial artificial chromosome library from the large-bowel microbiota of mice.

Authors:  Jens Walter; Marco Mangold; Gerald W Tannock
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

8.  Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor.

Authors:  Lynn L Williamson; Bradley R Borlee; Patrick D Schloss; Changhui Guan; Heather K Allen; Jo Handelsman
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

9.  Evolutionary and ecological consequences of gut microbial communities.

Authors:  Nancy A Moran; Howard Ochman; Tobin J Hammer
Journal:  Annu Rev Ecol Evol Syst       Date:  2019-08-29       Impact factor: 13.915

10.  Characterization and its potential application of two esterases derived from the arctic sediment metagenome.

Authors:  Jeong Ho Jeon; Jun-Tae Kim; Sung Gyun Kang; Jung-Hyun Lee; Sang-Jin Kim
Journal:  Mar Biotechnol (NY)       Date:  2008-09-24       Impact factor: 3.619

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