Literature DB >> 25156450

Microbial determinants of biochemical individuality and their impact on toxicology and pharmacology.

Andrew D Patterson1, Peter J Turnbaugh2.   

Abstract

Humans exhibit remarkable interindividual variations in the concentration of small molecules found throughout the body, due in part to concurrent variations in each person's associated microbial communities. Recent studies have begun to uncover how microbes interface with their host during exposure to drugs, dietary compounds, and environmental toxicants, with broader implications regarding the causes and consequences of biochemical individuality. Progress in this area will likely be an essential component of personalized medicine and might be accelerated through the implementation of experimental designs and theoretical principles honed through decades of work in the fields of toxicology and pharmacology.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 25156450      PMCID: PMC4252706          DOI: 10.1016/j.cmet.2014.07.002

Source DB:  PubMed          Journal:  Cell Metab        ISSN: 1550-4131            Impact factor:   27.287


  83 in total

1.  Ecology drives a global network of gene exchange connecting the human microbiome.

Authors:  Chris S Smillie; Mark B Smith; Jonathan Friedman; Otto X Cordero; Lawrence A David; Eric J Alm
Journal:  Nature       Date:  2011-10-30       Impact factor: 49.962

2.  Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins.

Authors:  Peter J Turnbaugh; Christopher Quince; Jeremiah J Faith; Alice C McHardy; Tanya Yatsunenko; Faheem Niazi; Jason Affourtit; Michael Egholm; Bernard Henrissat; Rob Knight; Jeffrey I Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-02       Impact factor: 11.205

Review 3.  Metabolism of foreign compounds by gastrointestinal microorganisms.

Authors:  R R Scheline
Journal:  Pharmacol Rev       Date:  1973-12       Impact factor: 25.468

4.  The phylogeny of prokaryotes.

Authors:  G E Fox; E Stackebrandt; R B Hespell; J Gibson; J Maniloff; T A Dyer; R S Wolfe; W E Balch; R S Tanner; L J Magrum; L B Zablen; R Blakemore; R Gupta; L Bonen; B J Lewis; D A Stahl; K R Luehrsen; K N Chen; C R Woese
Journal:  Science       Date:  1980-07-25       Impact factor: 47.728

5.  Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns.

Authors:  Maria G Dominguez-Bello; Elizabeth K Costello; Monica Contreras; Magda Magris; Glida Hidalgo; Noah Fierer; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

6.  Towards the human intestinal microbiota phylogenetic core.

Authors:  Julien Tap; Stanislas Mondot; Florence Levenez; Eric Pelletier; Christophe Caron; Jean-Pierre Furet; Edgardo Ugarte; Rafael Muñoz-Tamayo; Denis L E Paslier; Renaud Nalin; Joel Dore; Marion Leclerc
Journal:  Environ Microbiol       Date:  2009-07-06       Impact factor: 5.491

7.  Dynamics and associations of microbial community types across the human body.

Authors:  Tao Ding; Patrick D Schloss
Journal:  Nature       Date:  2014-04-16       Impact factor: 49.962

8.  Innate immunity and intestinal microbiota in the development of Type 1 diabetes.

Authors:  Li Wen; Ruth E Ley; Pavel Yu Volchkov; Peter B Stranges; Lia Avanesyan; Austin C Stonebraker; Changyun Hu; F Susan Wong; Gregory L Szot; Jeffrey A Bluestone; Jeffrey I Gordon; Alexander V Chervonsky
Journal:  Nature       Date:  2008-09-21       Impact factor: 49.962

9.  Gut microbiomes of Malawian twin pairs discordant for kwashiorkor.

Authors:  Michelle I Smith; Tanya Yatsunenko; Mark J Manary; Indi Trehan; Rajhab Mkakosya; Jiye Cheng; Andrew L Kau; Stephen S Rich; Patrick Concannon; Josyf C Mychaleckyj; Jie Liu; Eric Houpt; Jia V Li; Elaine Holmes; Jeremy Nicholson; Dan Knights; Luke K Ursell; Rob Knight; Jeffrey I Gordon
Journal:  Science       Date:  2013-01-30       Impact factor: 47.728

10.  Fecal microbial determinants of fecal and systemic estrogens and estrogen metabolites: a cross-sectional study.

Authors:  Roberto Flores; Jianxin Shi; Barbara Fuhrman; Xia Xu; Timothy D Veenstra; Mitchell H Gail; Pawel Gajer; Jacques Ravel; James J Goedert
Journal:  J Transl Med       Date:  2012-12-21       Impact factor: 5.531

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  18 in total

Review 1.  Cancer and the microbiota.

Authors:  Wendy S Garrett
Journal:  Science       Date:  2015-04-03       Impact factor: 47.728

Review 2.  An Intestinal Microbiota-Farnesoid X Receptor Axis Modulates Metabolic Disease.

Authors:  Frank J Gonzalez; Changtao Jiang; Andrew D Patterson
Journal:  Gastroenterology       Date:  2016-09-14       Impact factor: 22.682

3.  Epithelial delamination is protective during pharmaceutical-induced enteropathy.

Authors:  Scott T Espenschied; Mark R Cronan; Molly A Matty; Olaf Mueller; Matthew R Redinbo; David M Tobin; John F Rawls
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-07       Impact factor: 11.205

4.  Getting Our Fingers on the Pulse of Slow-Growing Bacteria in Hard-To-Reach Places.

Authors:  Tara Gallagher; Joann Phan; Katrine Whiteson
Journal:  J Bacteriol       Date:  2018-11-26       Impact factor: 3.490

Review 5.  The intestinal microbiome and surgical disease.

Authors:  Monika A Krezalek; Kinga B Skowron; Kristina L Guyton; Baddr Shakhsheer; Sanjiv Hyoju; John C Alverdy
Journal:  Curr Probl Surg       Date:  2016-06-14       Impact factor: 1.909

6.  Chemical Risk Assessment: Traditional vs Public Health Perspectives.

Authors:  Maureen R Gwinn; Daniel A Axelrad; Tina Bahadori; David Bussard; Wayne E Cascio; Kacee Deener; David Dix; Russell S Thomas; Robert J Kavlock; Thomas A Burke
Journal:  Am J Public Health       Date:  2017-05-18       Impact factor: 9.308

Review 7.  Signaling in Host-Associated Microbial Communities.

Authors:  Michael A Fischbach; Julia A Segre
Journal:  Cell       Date:  2016-03-10       Impact factor: 41.582

8.  A Probe-Enabled Approach for the Selective Isolation and Characterization of Functionally Active Subpopulations in the Gut Microbiome.

Authors:  Christopher Whidbey; Natalie C Sadler; Reji N Nair; Regan F Volk; Adrian J DeLeon; Lisa M Bramer; Sarah J Fansler; Joshua R Hansen; Anil K Shukla; Janet K Jansson; Brian D Thrall; Aaron T Wright
Journal:  J Am Chem Soc       Date:  2018-12-17       Impact factor: 15.419

Review 9.  The metabolic role of the gut microbiota in health and rheumatic disease: mechanisms and interventions.

Authors:  Shahla Abdollahi-Roodsaz; Steven B Abramson; Jose U Scher
Journal:  Nat Rev Rheumatol       Date:  2016-06-03       Impact factor: 20.543

10.  Snapshot on a Pilot Metagenomic Study for the Appraisal of Gut Microbial Diversity in Mice, Cat, and Man.

Authors:  Coline Plé; Louise-Eva Vandenborght; Nathalie Adele-Dit-Renseville; Jérôme Breton; Catherine Daniel; Stéphanie Ferreira; Foligné Benoît
Journal:  Gastroenterol Res Pract       Date:  2016-04-24       Impact factor: 2.260

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