Literature DB >> 12840004

An ADAR that edits transcripts encoding ion channel subunits functions as a dimer.

Angela Gallo1, Liam P Keegan, Gillian M Ring, Mary A O'Connell.   

Abstract

In this report, we establish that Drosophila ADAR (adenosine deaminase acting on RNA) forms a dimer on double-stranded (ds) RNA, a process essential for editing activity. The minimum region required for dimerization is the N-terminus and dsRNA-binding domain 1 (dsRBD1). Single point mutations within dsRBD1 abolish RNA-binding activity and dimer formation. These mutations and glycerol gradient analysis indicate that binding to dsRNA is important for dimerization. However, dimerization can be uncoupled from dsRNA-binding activity, as a deletion of the N-terminus (amino acids 1-46) yields a monomeric ADAR that retains the ability to bind dsRNA but is inactive in an editing assay, demonstrating that ADAR is only active as a dimer. Different isoforms of ADAR with different editing activities can form heterodimers and this can have a significant effect on editing in vitro as well as in vivo. We propose a model for ADAR dimerization whereby ADAR monomers first contact dsRNA; however, it is only when the second monomer binds and a dimer is formed that deamination occurs.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12840004      PMCID: PMC165651          DOI: 10.1093/emboj/cdg327

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  53 in total

1.  Structure of the double-stranded RNA-binding domain of the protein kinase PKR reveals the molecular basis of its dsRNA-mediated activation.

Authors:  S Nanduri; B W Carpick; Y Yang; B R Williams; J Qin
Journal:  EMBO J       Date:  1998-09-15       Impact factor: 11.598

Review 2.  RNA editing of brain glutamate receptor channels: mechanism and physiology.

Authors:  P H Seeburg; M Higuchi; R Sprengel
Journal:  Brain Res Brain Res Rev       Date:  1998-05

3.  Escherichia coli cytidine deaminase provides a molecular model for ApoB RNA editing and a mechanism for RNA substrate recognition.

Authors:  N Navaratnam; T Fujino; J Bayliss; A Jarmuz; A How; N Richardson; A Somasekaram; S Bhattacharya; C Carter; J Scott
Journal:  J Mol Biol       Date:  1998-01-30       Impact factor: 5.469

4.  Two forms of human double-stranded RNA-specific editase 1 (hRED1) generated by the insertion of an Alu cassette.

Authors:  A Gerber; M A O'Connell; W Keller
Journal:  RNA       Date:  1997-05       Impact factor: 4.942

5.  Regulation of serotonin-2C receptor G-protein coupling by RNA editing.

Authors:  C M Burns; H Chu; S M Rueter; L K Hutchinson; H Canton; E Sanders-Bush; R B Emeson
Journal:  Nature       Date:  1997-05-15       Impact factor: 49.962

6.  Potential Alu function: regulation of the activity of double-stranded RNA-activated kinase PKR.

Authors:  W M Chu; R Ballard; B W Carpick; B R Williams; C W Schmid
Journal:  Mol Cell Biol       Date:  1998-01       Impact factor: 4.272

7.  Structural requirements for RNA editing in glutamate receptor pre-mRNAs by recombinant double-stranded RNA adenosine deaminase.

Authors:  S Maas; T Melcher; A Herb; P H Seeburg; W Keller; S Krause; M Higuchi; M A O'Connell
Journal:  J Biol Chem       Date:  1996-05-24       Impact factor: 5.157

8.  Requirement of PKR dimerization mediated by specific hydrophobic residues for its activation by double-stranded RNA and its antigrowth effects in yeast.

Authors:  R C Patel; G C Sen
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

9.  Inhibition of double-stranded RNA-dependent protein kinase PKR by vaccinia virus E3: role of complex formation and the E3 N-terminal domain.

Authors:  P R Romano; F Zhang; S L Tan; M T Garcia-Barrio; M G Katze; T E Dever; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

10.  Double-stranded-RNA-dependent protein kinase and TAR RNA-binding protein form homo- and heterodimers in vivo.

Authors:  G P Cosentino; S Venkatesan; F C Serluca; S R Green; M B Mathews; N Sonenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-10       Impact factor: 11.205

View more
  51 in total

Review 1.  Activity regulation of adenosine deaminases acting on RNA (ADARs).

Authors:  Cesare Orlandi; Alessandro Barbon; Sergio Barlati
Journal:  Mol Neurobiol       Date:  2011-11-20       Impact factor: 5.590

2.  Extra double-stranded RNA binding domain (dsRBD) in a squid RNA editing enzyme confers resistance to high salt environment.

Authors:  Juan Pablo Palavicini; Rodrigo A Correa-Rojas; Joshua J C Rosenthal
Journal:  J Biol Chem       Date:  2012-03-28       Impact factor: 5.157

Review 3.  Adenosine deaminases acting on RNA, RNA editing, and interferon action.

Authors:  Cyril X George; Zhenji Gan; Yong Liu; Charles E Samuel
Journal:  J Interferon Cytokine Res       Date:  2010-12-23       Impact factor: 2.607

Review 4.  A-to-I RNA editing and human disease.

Authors:  Stefan Maas; Yukio Kawahara; Kristen M Tamburro; Kazuko Nishikura
Journal:  RNA Biol       Date:  2006-01-12       Impact factor: 4.652

5.  Chromosomal storage of the RNA-editing enzyme ADAR1 in Xenopus oocytes.

Authors:  Nina B Sallacz; Michael F Jantsch
Journal:  Mol Biol Cell       Date:  2005-04-20       Impact factor: 4.138

6.  SUMO-1 modification alters ADAR1 editing activity.

Authors:  Joana M P Desterro; Liam P Keegan; Ellis Jaffray; Ron T Hay; Mary A O'Connell; Maria Carmo-Fonseca
Journal:  Mol Biol Cell       Date:  2005-08-24       Impact factor: 4.138

7.  Sequestration and protection of double-stranded RNA by the betanodavirus b2 protein.

Authors:  Beau J Fenner; Winnie Goh; Jimmy Kwang
Journal:  J Virol       Date:  2006-07       Impact factor: 5.103

8.  Dimerization of ADAR2 is mediated by the double-stranded RNA binding domain.

Authors:  Hanne Poulsen; Rasmus Jorgensen; Anders Heding; Finn C Nielsen; Bjarne Bonven; Jan Egebjerg
Journal:  RNA       Date:  2006-05-08       Impact factor: 4.942

9.  Activation-induced deaminase, AID, is catalytically active as a monomer on single-stranded DNA.

Authors:  Sukhdev S Brar; Elizabeth J Sacho; Ingrid Tessmer; Deborah L Croteau; Dorothy A Erie; Marilyn Diaz
Journal:  DNA Repair (Amst)       Date:  2007-09-21

10.  Evidence for auto-inhibition by the N terminus of hADAR2 and activation by dsRNA binding.

Authors:  Mark R Macbeth; Arunth T Lingam; Brenda L Bass
Journal:  RNA       Date:  2004-10       Impact factor: 4.942

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.