Literature DB >> 9149227

Two forms of human double-stranded RNA-specific editase 1 (hRED1) generated by the insertion of an Alu cassette.

A Gerber1, M A O'Connell, W Keller.   

Abstract

The double-stranded RNA-specific editase 1 (RED1/ADAR2) is implicated in the editing of precursor-mRNAs (pre-mRNA) encoding subunits of glutamate receptors (GluRs) in brain. Site-specific deamination of adenosine to inosine alters the codon at the Q/R site in GluR-B rendering the heteromeric receptor impermeable to Ca2+ ions. We cloned human RED1 (hRED1/hADAR2) cDNAs from a brain cDNA library. The human enzyme is 95% identical to the rat homologue. We characterized two alternatively spliced forms that differed by the presence of an Alu-J cassette in the deaminase domain. For the long form containing the Alu cassette, we isolated cDNA clones with an alternative C-terminus and 3'-UTR. An 8.8-kb transcript of hRED1 is most abundant in brain and heart, and lower levels are detected in other tissues. In vitro editing assays with purified recombinant hRED1 containing or lacking the Alu-J cassette revealed that both forms of the protein have the same substrate specificity, but differ in their catalytic activity.

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Year:  1997        PMID: 9149227      PMCID: PMC1369496     

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  72 in total

Review 1.  RNA editing by adenosine deaminases that act on RNA.

Authors:  Brenda L Bass
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

2.  Species-specific exon loss in human transcriptomes.

Authors:  Jinkai Wang; Zhi-xiang Lu; Collin J Tokheim; Sara E Miller; Yi Xing
Journal:  Mol Biol Evol       Date:  2014-11-14       Impact factor: 16.240

3.  In vitro analysis of the binding of ADAR2 to the pre-mRNA encoding the GluR-B R/G site.

Authors:  M Ohman; A M Källman; B L Bass
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

4.  A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains.

Authors:  C X Chen; D S Cho; Q Wang; F Lai; K C Carter; K Nishikura
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

Review 5.  Activity regulation of adenosine deaminases acting on RNA (ADARs).

Authors:  Cesare Orlandi; Alessandro Barbon; Sergio Barlati
Journal:  Mol Neurobiol       Date:  2011-11-20       Impact factor: 5.590

Review 6.  The role of Alu elements in the cis-regulation of RNA processing.

Authors:  Chammiran Daniel; Mikaela Behm; Marie Öhman
Journal:  Cell Mol Life Sci       Date:  2015-07-30       Impact factor: 9.261

Review 7.  Adenosine deaminases acting on RNA, RNA editing, and interferon action.

Authors:  Cyril X George; Zhenji Gan; Yong Liu; Charles E Samuel
Journal:  J Interferon Cytokine Res       Date:  2010-12-23       Impact factor: 2.607

8.  ADAR1 RNA deaminase limits short interfering RNA efficacy in mammalian cells.

Authors:  Weidong Yang; Qingde Wang; Kelly L Howell; Joshua T Lee; Dan-Sung C Cho; John M Murray; Kazuko Nishikura
Journal:  J Biol Chem       Date:  2004-11-19       Impact factor: 5.157

9.  Altered RNA editing in mice lacking ADAR2 autoregulation.

Authors:  Yi Feng; Christopher L Sansam; Minati Singh; Ronald B Emeson
Journal:  Mol Cell Biol       Date:  2006-01       Impact factor: 4.272

Review 10.  A role for A-to-I RNA editing in temperature adaptation.

Authors:  Sandra C Garrett; Joshua J C Rosenthal
Journal:  Physiology (Bethesda)       Date:  2012-12
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