Literature DB >> 12834840

Self organization of membrane proteins via dimerization.

Peter J Woolf1, Jennifer J Linderman.   

Abstract

Protein-protein dimerization is ubiquitous in biology, but its role in self-organization remains unexplored. Here we use Monte Carlo simulations to demonstrate that under diffusion-limited conditions, reversible dimerization alone can cause membrane proteins to cluster into oligomer-like structures. When multiple distinct protein species are able to form dimers, then heterodimerization and homodimerization can organize proteins into structured clusters that can affect cellular physiology. As an example, we demonstrate how receptor dimerization could provide a physical mechanism for regulating information flow by controlling receptor-receptor cross talk. These results are physically realistic for some membrane proteins, including members of the G-protein coupled receptor family, and may provide a physiological reason as to why many proteins dimerize.

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Year:  2003        PMID: 12834840     DOI: 10.1016/s0301-4622(02)00369-1

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  24 in total

1.  Modeling the effect of deregulated proliferation and apoptosis on the growth dynamics of epithelial cell populations in vitro.

Authors:  Jörg Galle; Markus Loeffler; Dirk Drasdo
Journal:  Biophys J       Date:  2004-10-08       Impact factor: 4.033

2.  Monte Carlo simulations of receptor dynamics: insights into cell signaling.

Authors:  Christopher J Brinkerhoff; Peter J Woolf; Jennifer J Linderman
Journal:  J Mol Histol       Date:  2004-09       Impact factor: 2.611

3.  Reactions on cell membranes: comparison of continuum theory and Brownian dynamics simulations.

Authors:  Michael I Monine; Jason M Haugh
Journal:  J Chem Phys       Date:  2005-08-15       Impact factor: 3.488

4.  N-Ras forms dimers at POPC membranes.

Authors:  Jörn Güldenhaupt; Till Rudack; Peter Bachler; Daniel Mann; Gemma Triola; Herbert Waldmann; Carsten Kötting; Klaus Gerwert
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

Review 5.  Plasma membrane regulates Ras signaling networks.

Authors:  Tanmay Sanjeev Chavan; Serena Muratcioglu; Richard Marszalek; Hyunbum Jang; Ozlem Keskin; Attila Gursoy; Ruth Nussinov; Vadim Gaponenko
Journal:  Cell Logist       Date:  2016-02-18

6.  Presence or Absence of Ras Dimerization Shows Distinct Kinetic Signature in Ras-Raf Interaction.

Authors:  Sumantra Sarkar; Angel E García
Journal:  Biophys J       Date:  2020-03-14       Impact factor: 4.033

7.  Lipid raft-mediated regulation of G-protein coupled receptor signaling by ligands which influence receptor dimerization: a computational study.

Authors:  Mohammad Fallahi-Sichani; Jennifer J Linderman
Journal:  PLoS One       Date:  2009-08-11       Impact factor: 3.240

8.  The role of oligomerization and cooperative regulation in protein function: the case of tryptophan synthase.

Authors:  M Qaiser Fatmi; Chia-en A Chang
Journal:  PLoS Comput Biol       Date:  2010-11-11       Impact factor: 4.475

9.  Coupled stochastic spatial and non-spatial simulations of ErbB1 signaling pathways demonstrate the importance of spatial organization in signal transduction.

Authors:  Michelle N Costa; Krishnan Radhakrishnan; Bridget S Wilson; Dionisios G Vlachos; Jeremy S Edwards
Journal:  PLoS One       Date:  2009-07-23       Impact factor: 3.240

10.  Expression of excess receptors and negative feedback control of signal pathways are required for rapid activation and prompt cessation of signal transduction.

Authors:  Hiroshi Kobayashi; Ryuzo Azuma; Takuo Yasunaga
Journal:  Cell Commun Signal       Date:  2009-03-03       Impact factor: 5.712

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