Literature DB >> 12824408

EUGENE'HOM: A generic similarity-based gene finder using multiple homologous sequences.

Sylvain Foissac1, Philippe Bardou, Annick Moisan, Marie-Josée Cros, Thomas Schiex.   

Abstract

EUGENE'HOM is a gene prediction software for eukaryotic organisms based on comparative analysis. EUGENE'HOM is able to take into account multiple homologous sequences from more or less closely related organisms. It integrates the results of TBLASTX analysis, splice site and start codon prediction and a robust coding/non-coding probabilistic model which allows EUGENE'HOM to handle sequences from a variety of organisms. The current target of EUGENE'HOM is plant sequences. The EUGENE'HOM web site is available at http://genopole.toulouse.inra.fr/bioinfo/eugene/EuGeneHom/cgi-bin/EuGeneHom.pl.

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Year:  2003        PMID： 12824408      PMCID： PMC168992          DOI： 10.1093/nar/gkg586

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


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