Literature DB >> 12815261

NMR experiments for the measurement of proton-proton and carbon-carbon residual dipolar couplings in uniformly labelled oligosaccharides.

Manuel Martin-Pastor1, Angeles Canales-Mayordomo, Jesús Jiménez-Barbero.   

Abstract

A 2D-HSQC-carbon selective/proton selective-constant time COSY, 2D-HSQC-(sel C, sel H)-CT COSY experiment, which is applicable to uniformly (13)C isotopically enriched samples (U-(13)C) of oligosaccharides or oligonucleotides is proposed for the measurement of proton-proton RDC in crowded regions of 2D-spectra. In addition, a heteronuclear constant time-COSY experiment, (13)C-(13)C CT-COSY, is proposed for the measurement of one bond carbon-carbon RDC in these molecules. These two methods provide an extension, to U-(13)C molecules, of the original homonuclear constant time-COSY experiment proposed by Tian et al. (1999) for saccharides. The combination of a number of these RDC with NOE data may provide the method of choice to study oligosaccharide conformation in the free and receptor-bound state.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12815261     DOI: 10.1023/a:1024096807537

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  13 in total

1.  Domain orientation and dynamics in multidomain proteins from residual dipolar couplings.

Authors:  M W Fischer; J A Losonczi; J L Weaver; J H Prestegard
Journal:  Biochemistry       Date:  1999-07-13       Impact factor: 3.162

2.  Conformational analysis of a flexible oligosaccharide using residual dipolar couplings.

Authors:  F Tian; H M Al-Hashimi; J L Craighead; J H Prestegard
Journal:  J Am Chem Soc       Date:  2001-01-24       Impact factor: 15.419

3.  Measurement of homonuclear proton couplings based on cross-peak nulling in CT-COSY.

Authors:  Z Wu; A Bax
Journal:  J Magn Reson       Date:  2001-08       Impact factor: 2.229

4.  Glycobiology: Toward Understanding the Function of Sugars.

Authors:  Raymond A. Dwek
Journal:  Chem Rev       Date:  1996-03-28       Impact factor: 60.622

Review 5.  New techniques in structural NMR--anisotropic interactions.

Authors:  J H Prestegard
Journal:  Nat Struct Biol       Date:  1998-07

6.  Short selective pulses for biochemical applications.

Authors:  E Kupce; J Boyd; I D Campbell
Journal:  J Magn Reson B       Date:  1995-03

7.  Refined structure of a flexible heptasaccharide using 1H-13C and 1H-1H NMR residual dipolar couplings in concert with NOE and long range scalar coupling constants.

Authors:  M Martin-Pastor; C A Bush
Journal:  J Biomol NMR       Date:  2001-02       Impact factor: 2.835

8.  An alternative method for pucker determination in carbohydrates from residual dipolar couplings: a solution NMR study of the fructofuranosyl ring of sucrose.

Authors:  Darón I Freedberg
Journal:  J Am Chem Soc       Date:  2002-03-13       Impact factor: 15.419

9.  Conformational selection of glycomimetics at enzyme catalytic sites: experimental demonstration of the binding of distinct high-energy distorted conformations of C-, S-, and O-glycosides by E. Coli beta-galactosidases.

Authors:  Alicia García-Herrero; Esther Montero; Jose L Muñoz; Juan F Espinosa; Alejandro Vián; Jose L García; Juan L Asensio; F Javier Cañada; Jesus Jiménez-Barbero
Journal:  J Am Chem Soc       Date:  2002-05-01       Impact factor: 15.419

10.  Studies of the bound conformations of methyl alpha-lactoside and methyl beta-allolactoside to ricin B chain using transferred NOE experiments in the laboratory and rotating frames, assisted by molecular mechanics and dynamics calculations.

Authors:  J L Asensio; F J Cañada; J Jimenez-Barbero
Journal:  Eur J Biochem       Date:  1995-10-15
View more
  3 in total

1.  Structural monitoring of oligosaccharides through 13C enrichment and NMR observation of acetyl groups.

Authors:  Fei Yu; J H Prestegard
Journal:  Biophys J       Date:  2006-06-16       Impact factor: 4.033

2.  NMR structure analysis of uniformly 13C-labeled carbohydrates.

Authors:  Carolina Fontana; Helena Kovacs; Göran Widmalm
Journal:  J Biomol NMR       Date:  2014-04-26       Impact factor: 2.835

3.  Realizing the Promise of Chemical Glycobiology.

Authors:  Lai-Xi Wang; Benjamin G Davis
Journal:  Chem Sci       Date:  2013-09-01       Impact factor: 9.825

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.