Literature DB >> 11971730

Conformational selection of glycomimetics at enzyme catalytic sites: experimental demonstration of the binding of distinct high-energy distorted conformations of C-, S-, and O-glycosides by E. Coli beta-galactosidases.

Alicia García-Herrero1, Esther Montero, Jose L Muñoz, Juan F Espinosa, Alejandro Vián, Jose L García, Juan L Asensio, F Javier Cañada, Jesus Jiménez-Barbero.   

Abstract

We show that the conformational features of the molecular complexes of E. coli beta-galactosidase and O-glycosides may differ from those formed with closely related compounds in their chemical nature, such as C- and S-glycosyl analogues. In the particular case presented here, NMR and ab initio quantum mechanical results show that the 3D-shapes of the ligand/inhibitor within the enzyme binding site depend on the chemical nature of the compounds. In fact, they depend on the relative size of the stereoelectronic barriers for chair deformation or for rotation around Phi glycosidic linkage.

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Year:  2002        PMID: 11971730     DOI: 10.1021/ja0122445

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  6 in total

1.  Stereocontrolled 1-S-glycosylation and comparative binding studies of photoprobe-thiosaccharide conjugates with their O-linked analogs.

Authors:  Lingquan Deng; Xin Wang; Suji Uppalapati; Oscar Norberg; Hai Dong; Adrien Joliton; Mingdi Yan; Olof Ramström
Journal:  Pure Appl Chem       Date:  2013-01       Impact factor: 2.453

2.  Synthesis of C-glycoside analogues of beta-galactosamine-(1-->4)-3-O-methyl-D-chiro-inositol and assay as activator of protein phosphatases PDHP and PP2Calpha.

Authors:  Sunej K Hans; Fatoumata Camara; Ahmad Altiti; Alejandro Martín-Montalvo; David L Brautigan; Douglas Heimark; Joseph Larner; Scott Grindrod; Milton L Brown; David R Mootoo
Journal:  Bioorg Med Chem       Date:  2010-01-04       Impact factor: 3.641

3.  NMR experiments for the measurement of proton-proton and carbon-carbon residual dipolar couplings in uniformly labelled oligosaccharides.

Authors:  Manuel Martin-Pastor; Angeles Canales-Mayordomo; Jesús Jiménez-Barbero
Journal:  J Biomol NMR       Date:  2003-08       Impact factor: 2.835

4.  The complete conformational free energy landscape of β-xylose reveals a two-fold catalytic itinerary for β-xylanases.

Authors:  Javier Iglesias-Fernández; Lluís Raich; Albert Ardèvol; Carme Rovira
Journal:  Chem Sci       Date:  2014-10-27       Impact factor: 9.825

5.  The Conformation of the Mannopyranosyl Phosphate Repeating Unit of the Capsular Polysaccharide of Neisseria meningitidis Serogroup A and Its Carba-Mimetic.

Authors:  Ilaria Calloni; Luca Unione; Gonzalo Jiménez-Osés; Francisco Corzana; Linda Del Bino; Alessio Corrado; Olimpia Pitirollo; Cinzia Colombo; Luigi Lay; Roberto Adamo; Jesús Jiménez-Barbero
Journal:  European J Org Chem       Date:  2018-08-17

Review 6.  Protein-carbohydrate interactions studied by NMR: from molecular recognition to drug design.

Authors:  Maria del Carmen Fernández-Alonso; Dolores Díaz; Manuel Álvaro Berbis; Filipa Marcelo; Javier Cañada; Jesús Jiménez-Barbero
Journal:  Curr Protein Pept Sci       Date:  2012-12       Impact factor: 3.272

  6 in total

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