Literature DB >> 12790180

How much information is associated with a particular stimulus?

Daniel A Butts1.   

Abstract

Although the Shannon mutual information can be used to reveal general features of the neural code, it cannot directly address which symbols of the code are significant. Further insight can be gained by using information measures that are specific to particular stimuli or responses. The specific information is a previously proposed measure of the amount of information associated with a particular response; however, as I show, it does not properly characterize the amount of information associated with particular stimuli. Instead, I propose a new measure: the stimulus-specific information (SSI), defined to be the average specific information of responses given the presence of a particular stimulus. Like other information theoretic measures, the SSI does not rely on assumptions about the neural code, and is robust to non-linearities of the system. To demonstrate its applicability, the SSI is applied to data from simulated visual neurons, and identifies stimuli consistent with the neuron's linear kernel. While the SSI reveals the essential linearity of the visual neurons, it also successfully identifies the well-encoded stimuli in a modified example where linear analysis techniques fail. Thus, I demonstrate that the SSI is an appropriate measure of the information associated with particular stimuli, and provides a new unbiased method of analysing the significant stimuli of a neural code.

Mesh:

Year:  2003        PMID: 12790180

Source DB:  PubMed          Journal:  Network        ISSN: 0954-898X            Impact factor:   1.273


  23 in total

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Journal:  J Neurosci       Date:  2010-10-06       Impact factor: 6.167

2.  Locomotion Enhances Neural Encoding of Visual Stimuli in Mouse V1.

Authors:  Maria C Dadarlat; Michael P Stryker
Journal:  J Neurosci       Date:  2017-03-06       Impact factor: 6.167

Review 3.  A Tutorial for Information Theory in Neuroscience.

Authors:  Nicholas M Timme; Christopher Lapish
Journal:  eNeuro       Date:  2018-09-11

4.  Brain-generated estradiol drives long-term optimization of auditory coding to enhance the discrimination of communication signals.

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Authors:  Y Zheng; M A Escabí
Journal:  J Neurophysiol       Date:  2013-05-01       Impact factor: 2.714

6.  Decoding stimulus duration from neural responses in the auditory midbrain.

Authors:  Brandon Aubie; Riziq Sayegh; Thane Fremouw; Ellen Covey; Paul A Faure
Journal:  J Neurophysiol       Date:  2014-08-13       Impact factor: 2.714

7.  Decomposing information into copying versus transformation.

Authors:  Artemy Kolchinsky; Bernat Corominas-Murtra
Journal:  J R Soc Interface       Date:  2020-01-22       Impact factor: 4.118

8.  Synergy from silence in a combinatorial neural code.

Authors:  Elad Schneidman; Jason L Puchalla; Ronen Segev; Robert A Harris; William Bialek; Michael J Berry
Journal:  J Neurosci       Date:  2011-11-02       Impact factor: 6.167

9.  Rapid Rebalancing of Excitation and Inhibition by Cortical Circuitry.

Authors:  Alexandra K Moore; Aldis P Weible; Timothy S Balmer; Laurence O Trussell; Michael Wehr
Journal:  Neuron       Date:  2018-03-01       Impact factor: 17.173

Review 10.  Roles of centromedian parafascicular nuclei of thalamus and cholinergic interneurons in the dorsal striatum in associative learning of environmental events.

Authors:  Ko Yamanaka; Yukiko Hori; Takafumi Minamimoto; Hiroshi Yamada; Naoyuki Matsumoto; Kazuki Enomoto; Toshihiko Aosaki; Ann M Graybiel; Minoru Kimura
Journal:  J Neural Transm (Vienna)       Date:  2017-03-21       Impact factor: 3.575

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