Literature DB >> 12776180

Specific inhibition of gene expression using a stably integrated, inducible small-interfering-RNA vector.

Marc van de Wetering1, Irma Oving, Vanesa Muncan, Menno Tjon Pon Fong, Helen Brantjes, Dik van Leenen, Frank C P Holstege, Thijn R Brummelkamp, Reuven Agami, Hans Clevers.   

Abstract

We have designed a doxycycline-regulated form of the H1 promoter of RNA polymerase III that allows the inducible knockdown of gene expression by small interfering RNAs (siRNAs). As a proof-of-principle, we have targeted beta-catenin in colorectal cancer (CRC) cells. T-cell factor (TCF) target-gene expression is induced by accumulated beta-catenin, and is the main transforming event in these cells. We have shown previously that the disruption of beta-catenin/TCF4 activity in CRC cells by the overexpression of dominant-negative TCF induces rapid G1 arrest and differentiation. Stable integration of our inducible siRNA vector allowed the rapid production of siRNAs on doxycycline induction, followed by specific downregulation of beta-catenin. In these CRC cells, TCF reporter-gene activity was inhibited, and G1 arrest and differentiation occurred. The inhibition of two other genes using this vector system shows that it should be useful for the inducible knockdown of gene expression.

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Year:  2003        PMID: 12776180      PMCID: PMC1319205          DOI: 10.1038/sj.embor.embor865

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  29 in total

1.  Short hairpin RNAs (shRNAs) induce sequence-specific silencing in mammalian cells.

Authors:  Patrick J Paddison; Amy A Caudy; Emily Bernstein; Gregory J Hannon; Douglas S Conklin
Journal:  Genes Dev       Date:  2002-04-15       Impact factor: 11.361

2.  U6 promoter-driven siRNAs with four uridine 3' overhangs efficiently suppress targeted gene expression in mammalian cells.

Authors:  Makoto Miyagishi; Kazunari Taira
Journal:  Nat Biotechnol       Date:  2002-05       Impact factor: 54.908

3.  Gene silencing using micro-RNA designed hairpins.

Authors:  Michael T McManus; Christian P Petersen; Brian B Haines; Jianzhu Chen; Phillip A Sharp
Journal:  RNA       Date:  2002-06       Impact factor: 4.942

Review 4.  Gene silencing in mammals by small interfering RNAs.

Authors:  Michael T McManus; Phillip A Sharp
Journal:  Nat Rev Genet       Date:  2002-10       Impact factor: 53.242

Review 5.  RNA interference: the new somatic cell genetics?

Authors:  Patrick J Paddison; Gregory J Hannon
Journal:  Cancer Cell       Date:  2002-07       Impact factor: 31.743

6.  A system for stable expression of short interfering RNAs in mammalian cells.

Authors:  Thijn R Brummelkamp; René Bernards; Reuven Agami
Journal:  Science       Date:  2002-03-21       Impact factor: 47.728

7.  Effective expression of small interfering RNA in human cells.

Authors:  Cynthia P Paul; Paul D Good; Ira Winer; David R Engelke
Journal:  Nat Biotechnol       Date:  2002-05       Impact factor: 54.908

8.  RNA interference by expression of short-interfering RNAs and hairpin RNAs in mammalian cells.

Authors:  Jenn-Yah Yu; Stacy L DeRuiter; David L Turner
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-23       Impact factor: 11.205

9.  Target disruption of the mutant beta-catenin gene in colon cancer cell line HCT116: preservation of its malignant phenotype.

Authors:  Shigeki Sekine; Tatsuhiro Shibata; Michiie Sakamoto; Setsuo Hirohashi
Journal:  Oncogene       Date:  2002-08-29       Impact factor: 9.867

10.  Targeted inactivation of CTNNB1 reveals unexpected effects of beta-catenin mutation.

Authors:  Timothy A Chan; Zhenghe Wang; Long H Dang; Bert Vogelstein; Kenneth W Kinzler
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

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  187 in total

1.  Inducible shRNA expression for application in a prostate cancer mouse model.

Authors:  Frank Czauderna; Ansgar Santel; Michael Hinz; Melanie Fechtner; Birgit Durieux; Gerald Fisch; Frauke Leenders; Wolfgang Arnold; Klaus Giese; Anke Klippel; Jörg Kaufmann
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

2.  Conditional gene knock-down by CRE-dependent short interfering RNAs.

Authors:  Lauriane Fritsch; Luis A Martinez; Redha Sekhri; Irina Naguibneva; Mathieu Gérard; Marie Vandromme; Laurent Schaeffer; Annick Harel-Bellan
Journal:  EMBO Rep       Date:  2004-01-09       Impact factor: 8.807

3.  A universal transgene silencing method based on RNA interference.

Authors:  Philippe-Emmanuel Mangeot; François-Loïc Cosset; Pierre Colas; Ivan Mikaelian
Journal:  Nucleic Acids Res       Date:  2004-07-12       Impact factor: 16.971

Review 4.  Optimizing RNA interference for application in mammalian cells.

Authors:  René H Medema
Journal:  Biochem J       Date:  2004-06-15       Impact factor: 3.857

5.  Control of siRNA expression using the Cre-loxP recombination system.

Authors:  Vivi Kasim; Makoto Miyagishi; Kazunari Taira
Journal:  Nucleic Acids Res       Date:  2004-04-23       Impact factor: 16.971

6.  Tandem affinity purification combined with inducible shRNA expression as a tool to study the maturation of macromolecular assemblies.

Authors:  Emanuel Wyler; Mirjam Zimmermann; Barbara Widmann; Matthias Gstaiger; Jens Pfannstiel; Ulrike Kutay; Ivo Zemp
Journal:  RNA       Date:  2010-11-19       Impact factor: 4.942

7.  Loss of programmed cell death 4 induces apoptosis by promoting the translation of procaspase-3 mRNA.

Authors:  K Eto; S Goto; W Nakashima; Y Ura; S-I Abe
Journal:  Cell Death Differ       Date:  2011-09-30       Impact factor: 15.828

Review 8.  RNA interference technologies for understanding and treating neurodegenerative diseases.

Authors:  Bingwei Lu
Journal:  Neuromolecular Med       Date:  2004       Impact factor: 3.843

9.  Human SMC2 protein, a core subunit of human condensin complex, is a novel transcriptional target of the WNT signaling pathway and a new therapeutic target.

Authors:  Verónica Dávalos; Lucía Súarez-López; Julio Castaño; Anthea Messent; Ibane Abasolo; Yolanda Fernandez; Angel Guerra-Moreno; Eloy Espín; Manel Armengol; Eva Musulen; Aurelio Ariza; Joan Sayós; Diego Arango; Simó Schwartz
Journal:  J Biol Chem       Date:  2012-10-24       Impact factor: 5.157

10.  RINT-1 serves as a tumor suppressor and maintains Golgi dynamics and centrosome integrity for cell survival.

Authors:  Xiaoqin Lin; Chang-Ching Liu; Qing Gao; Xiaohai Zhang; GuiKai Wu; Wen-Hwa Lee
Journal:  Mol Cell Biol       Date:  2007-04-30       Impact factor: 4.272

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