Literature DB >> 12775689

Protein synthesis in Escherichia coli with mischarged tRNA.

Bokkee Min1, Makoto Kitabatake, Carla Polycarpo, Joanne Pelaschier, Gregory Raczniak, Benfang Ruan, Hiroyuki Kobayashi, Suk Namgoong, Dieter Söll.   

Abstract

Two types of aspartyl-tRNA synthetase exist: the discriminating enzyme (D-AspRS) forms only Asp-tRNA(Asp), while the nondiscriminating one (ND-AspRS) also synthesizes Asp-tRNA(Asn), a required intermediate in protein synthesis in many organisms (but not in Escherichia coli). On the basis of the E. coli trpA34 missense mutant transformed with heterologous ND-aspS genes, we developed a system with which to measure the in vivo formation of Asp-tRNA(Asn) and its acceptance by elongation factor EF-Tu. While large amounts of Asp-tRNA(Asn) are detrimental to E. coli, smaller amounts support protein synthesis and allow the formation of up to 38% of the wild-type level of missense-suppressed tryptophan synthetase.

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Year:  2003        PMID: 12775689      PMCID: PMC156233          DOI: 10.1128/JB.185.12.3524-3526.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  19 in total

1.  The structure of an AspRS-tRNA(Asp) complex reveals a tRNA-dependent control mechanism.

Authors:  L Moulinier; S Eiler; G Eriani; J Gangloff; J C Thierry; K Gabriel; W H McClain; D Moras
Journal:  EMBO J       Date:  2001-09-17       Impact factor: 11.598

Review 2.  Aminoacyl-tRNA synthesis.

Authors:  M Ibba; D Soll
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

3.  Domain-specific recruitment of amide amino acids for protein synthesis.

Authors:  D L Tumbula; H D Becker; W Z Chang; D Söll
Journal:  Nature       Date:  2000-09-07       Impact factor: 49.962

4.  Substrate recognition by class I lysyl-tRNA synthetases: a molecular basis for gene displacement.

Authors:  M Ibba; H C Losey; Y Kawarabayasi; H Kikuchi; S Bunjun; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1999-01-19       Impact factor: 11.205

5.  Transfer RNA-dependent amino acid biosynthesis: an essential route to asparagine formation.

Authors:  Bokkee Min; Joanne T Pelaschier; David E Graham; Debra Tumbula-Hansen; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

6.  Thermus thermophilus contains an eubacterial and an archaebacterial aspartyl-tRNA synthetase.

Authors:  H D Becker; H Roy; L Moulinier; M H Mazauric; G Keith; D Kern
Journal:  Biochemistry       Date:  2000-03-28       Impact factor: 3.162

7.  A single amidotransferase forms asparaginyl-tRNA and glutaminyl-tRNA in Chlamydia trachomatis.

Authors:  G Raczniak; H D Becker; B Min; D Söll
Journal:  J Biol Chem       Date:  2001-10-03       Impact factor: 5.157

8.  Uniform binding of aminoacyl-tRNAs to elongation factor Tu by thermodynamic compensation.

Authors:  F J LaRiviere; A D Wolfson; O C Uhlenbeck
Journal:  Science       Date:  2001-10-05       Impact factor: 47.728

9.  Construction of two Escherichia coli amber suppressor genes: tRNAPheCUA and tRNACysCUA.

Authors:  J Normanly; J M Masson; L G Kleina; J Abelson; J H Miller
Journal:  Proc Natl Acad Sci U S A       Date:  1986-09       Impact factor: 11.205

10.  Evolutionary divergence of the archaeal aspartyl-tRNA synthetases into discriminating and nondiscriminating forms.

Authors:  Debra Tumbula-Hansen; Liang Feng; Helen Toogood; Karl O Stetter; Dieter Söll
Journal:  J Biol Chem       Date:  2002-07-30       Impact factor: 5.157

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  14 in total

Review 1.  Aminoacyl-tRNA synthetase complexes: molecular multitasking revealed.

Authors:  Corinne D Hausmann; Michael Ibba
Journal:  FEMS Microbiol Rev       Date:  2008-06-03       Impact factor: 16.408

2.  Misacylation of specific nonmethionyl tRNAs by a bacterial methionyl-tRNA synthetase.

Authors:  Thomas E Jones; Rebecca W Alexander; Tao Pan
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-11       Impact factor: 11.205

3.  tRNA acceptor stem and anticodon bases form independent codes related to protein folding.

Authors:  Charles W Carter; Richard Wolfenden
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-01       Impact factor: 11.205

4.  The nondiscriminating aspartyl-tRNA synthetase from Helicobacter pylori: anticodon-binding domain mutations that impact tRNA specificity and heterologous toxicity.

Authors:  Pitak Chuawong; Tamara L Hendrickson
Journal:  Biochemistry       Date:  2006-07-04       Impact factor: 3.162

5.  Characterization of Gtf1p, the connector subunit of yeast mitochondrial tRNA-dependent amidotransferase.

Authors:  Mario H Barros; Malgorzata Rak; Janaina A Paulela; Alexander Tzagoloff
Journal:  J Biol Chem       Date:  2011-07-28       Impact factor: 5.157

6.  Pyrrolysine analogues as substrates for pyrrolysyl-tRNA synthetase.

Authors:  Carla R Polycarpo; Stephanie Herring; Amélie Bérubé; John L Wood; Dieter Söll; Alexandre Ambrogelly
Journal:  FEBS Lett       Date:  2006-11-20       Impact factor: 4.124

7.  Conserved discrimination against misacylated tRNAs by two mesophilic elongation factor Tu orthologs.

Authors:  Terry J T Cathopoulis; Pitak Chuawong; Tamara L Hendrickson
Journal:  Biochemistry       Date:  2008-07-22       Impact factor: 3.162

Review 8.  Amino acid modifications on tRNA.

Authors:  Jing Yuan; Kelly Sheppard; Dieter Söll
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2008-07       Impact factor: 3.848

9.  Quality control despite mistranslation caused by an ambiguous genetic code.

Authors:  Benfang Ruan; Sotiria Palioura; Jeffrey Sabina; Laure Marvin-Guy; Sunil Kochhar; Robert A Larossa; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-22       Impact factor: 11.205

10.  Severe oxidative stress induces protein mistranslation through impairment of an aminoacyl-tRNA synthetase editing site.

Authors:  Jiqiang Ling; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-16       Impact factor: 11.205

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