Literature DB >> 12766396

Fast multi-dimensional NMR of proteins.

Eriks Kupce1, Ray Freeman.   

Abstract

Three-dimensional HNCO and HNCA subspectra from a small protein (agitoxin, 4 kDa, enriched in carbon-13 and nitrogen-15), have been obtained by direct frequency-domain excitation of selected carbon and nitrogen sites. This new technique applies an array of several simultaneous soft radiofrequency spin-inversion pulses, encoded (on or off) according to nested Hadamard matrices, and the resulting responses are extracted by reference to the same matrices. This not only simplifies the spectra but, by avoiding extensive sampling in the traditional evolution dimensions, affords a speed advantage of more than two orders of magnitude.

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Year:  2003        PMID: 12766396     DOI: 10.1023/a:1023066715071

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  2 in total

1.  Hadamard excitation sculpting.

Authors:  K Krishnamurthy
Journal:  J Magn Reson       Date:  2001-11       Impact factor: 2.229

2.  Solution structure of the potassium channel inhibitor agitoxin 2: caliper for probing channel geometry.

Authors:  A M Krezel; C Kasibhatla; P Hidalgo; R MacKinnon; G Wagner
Journal:  Protein Sci       Date:  1995-08       Impact factor: 6.725

  2 in total
  7 in total

1.  Reconstruction of the three-dimensional NMR spectrum of a protein from a set of plane projections.

Authors:  Eriks Kupce; Ray Freeman
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

2.  GFT NMR experiments for polypeptide backbone and 13Cbeta chemical shift assignment.

Authors:  Seho Kim; Thomas Szyperski
Journal:  J Biomol NMR       Date:  2004-02       Impact factor: 2.835

3.  Quantitation of rapid proton-deuteron amide exchange using hadamard spectroscopy.

Authors:  Catherine Bougault; Lianmei Feng; John Glushka; Eriks Kupce; J H Prestegard
Journal:  J Biomol NMR       Date:  2004-04       Impact factor: 2.835

4.  AUTOBA: automation of backbone assignment from HN(C)N suite of experiments.

Authors:  Aditi Borkar; Dinesh Kumar; Ramakrishna V Hosur
Journal:  J Biomol NMR       Date:  2011-05-29       Impact factor: 2.835

5.  A unified NMR strategy for high-throughput determination of backbone fold of small proteins.

Authors:  Dinesh Kumar; Anmol Gautam; Ramakrishna V Hosur
Journal:  J Struct Funct Genomics       Date:  2012-09-28

6.  Automated robust and accurate assignment of protein resonances for solid state NMR.

Authors:  Jakob Toudahl Nielsen; Natalia Kulminskaya; Morten Bjerring; Niels Chr Nielsen
Journal:  J Biomol NMR       Date:  2014-05-10       Impact factor: 2.835

7.  Sparse sampling methods in multidimensional NMR.

Authors:  Mehdi Mobli; Mark W Maciejewski; Adam D Schuyler; Alan S Stern; Jeffrey C Hoch
Journal:  Phys Chem Chem Phys       Date:  2012-04-05       Impact factor: 3.676

  7 in total

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