Literature DB >> 12756533

Construction of a mitotic linkage map of Fusarium oxysporum based on Foxy-AFLPs.

H A S Teunissen1, M Rep, P M Houterman, B J C Cornelissen, M A Haring.   

Abstract

Construction of the first mitotic linkage map of the asexual fungus Fusarium oxysporum, based on a population of 32 parasexual fusion products, is reported. Molecular markers were developed using a modified AFLP technique which combines a Foxy-specific primer with standard adapter primers. The retroposon Foxy is abundantly present and highly variable in location in F. oxysporum isolates: 43% of the Foxy-AFLP markers tested appeared to be polymorphic between the strains Fol004 and Fol029. Of the 102 Foxy markers obtained, 83 segregated in a 1:1 ratio. The remaining fragments showed a skewed segregation pattern in which the Fol004 derived Foxy fragments were overrepresented. Foxy markers were observed to be clustered, suggesting that active Foxy elements may not transpose very far from their initial insertion sites, or that hotspots for insertion may exist. Linkage analysis revealed 23 linkage groups. Physical linkage between segregating markers predicted to be 20 cM apart was confirmed, indicating that the mitotic linkage map is reliable.

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Year:  2003        PMID: 12756533     DOI: 10.1007/s00438-003-0825-3

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  37 in total

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Authors:  H A S Teunissen; J Verkooijen; B J C Cornelissen; M A Haring
Journal:  Mol Genet Genomics       Date:  2002-10-24       Impact factor: 3.291

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Journal:  Curr Genet       Date:  2008-03-26       Impact factor: 3.886

2.  Multiple Evolutionary Trajectories Have Led to the Emergence of Races in Fusarium oxysporum f. sp. lycopersici.

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Journal:  Appl Environ Microbiol       Date:  2017-02-01       Impact factor: 4.792

3.  A one-step method to convert vectors into binary vectors suited for Agrobacterium-mediated transformation.

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4.  MITEs in the promoters of effector genes allow prediction of novel virulence genes in Fusarium oxysporum.

Authors:  Sarah M Schmidt; Petra M Houterman; Ines Schreiver; Lisong Ma; Stefan Amyotte; Biju Chellappan; Sjef Boeren; Frank L W Takken; Martijn Rep
Journal:  BMC Genomics       Date:  2013-02-22       Impact factor: 3.969

5.  Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.

Authors:  Li-Jun Ma; H Charlotte van der Does; Katherine A Borkovich; Jeffrey J Coleman; Marie-Josée Daboussi; Antonio Di Pietro; Marie Dufresne; Michael Freitag; Manfred Grabherr; Bernard Henrissat; Petra M Houterman; Seogchan Kang; Won-Bo Shim; Charles Woloshuk; Xiaohui Xie; Jin-Rong Xu; John Antoniw; Scott E Baker; Burton H Bluhm; Andrew Breakspear; Daren W Brown; Robert A E Butchko; Sinead Chapman; Richard Coulson; Pedro M Coutinho; Etienne G J Danchin; Andrew Diener; Liane R Gale; Donald M Gardiner; Stephen Goff; Kim E Hammond-Kosack; Karen Hilburn; Aurélie Hua-Van; Wilfried Jonkers; Kemal Kazan; Chinnappa D Kodira; Michael Koehrsen; Lokesh Kumar; Yong-Hwan Lee; Liande Li; John M Manners; Diego Miranda-Saavedra; Mala Mukherjee; Gyungsoon Park; Jongsun Park; Sook-Young Park; Robert H Proctor; Aviv Regev; M Carmen Ruiz-Roldan; Divya Sain; Sharadha Sakthikumar; Sean Sykes; David C Schwartz; B Gillian Turgeon; Ilan Wapinski; Olen Yoder; Sarah Young; Qiandong Zeng; Shiguo Zhou; James Galagan; Christina A Cuomo; H Corby Kistler; Martijn Rep
Journal:  Nature       Date:  2010-03-18       Impact factor: 49.962

  5 in total

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