Literature DB >> 12755605

Analysis of flash-induced FTIR difference spectra of the S-state cycle in the photosynthetic water-oxidizing complex by uniform 15N and 13C isotope labeling.

Takumi Noguchi1, Miwa Sugiura.   

Abstract

Protein bands in flash-induced Fourier transform infrared (FTIR) difference spectra of the S-state cycle of photosynthetic water oxidation were analyzed by uniform (15)N and (13)C isotopic labeling of photosystem II (PS II). The difference spectra upon first- to fourth-flash illumination were obtained with hydrated (for the 1800-1200 cm(-)(1) region) or deuterated (for the 3500-3100 cm(-)(1) region) films of unlabeled, (15)N-labeled, and (13)C-labeled PS II core complexes from Thermosynechococcus elongatus. Shifts of band frequencies upon (15)N and (13)C labeling provided the assignments of major peaks in the regions of 3450-3250 and 1700-1630 cm(-)(1) to the NH stretches and amide I modes of polypeptide backbones, respectively, and the assignments of some of the peaks in the 1600-1500 cm(-)(1) region to the amide II modes of backbones. Other prominent peaks in the latter region and most of the peaks in the 1450-1300 cm(-)(1) region exhibited large downshifts upon (13)C labeling but were unchanged by (15)N labeling, and hence assigned to the asymmetric and symmetric COO(-) stretching vibrations, respectively, of carboxylate groups in Glu, Asp, or the C-terminus. Peak positions corresponded well with each other among the first- to fourth-flash spectra, and most of the bands in the first- and/or second-flash spectra appeared with opposite signs of intensity in the third- and/or fourth-flash spectra. This observation indicates that the protein movements in the S(1)-->S(2) and/or S(2)-->S(3) transitions are mostly reversed in the S(3)-->S(0) and/or S(0)-->S(1) transitions, representing a catalytic role of the protein moieties of the water-oxidizing complex. Drastic structural changes in carboxylate groups over the S-state cycle suggest that the Asp and/or Glu side chains play important roles in the reaction mechanism of photosynthetic water oxidation.

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Year:  2003        PMID: 12755605     DOI: 10.1021/bi0341612

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  Oxidation of the Mn cluster induces structural changes of NO3- functionally bound to the Cl- site in the oxygen-evolving complex of photosystem II.

Authors:  Koji Hasegawa; Yukihiro Kimura; Taka-aki Ono
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

2.  Redox potential of the terminal quinone electron acceptor QB in photosystem II reveals the mechanism of electron transfer regulation.

Authors:  Yuki Kato; Ryo Nagao; Takumi Noguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-29       Impact factor: 11.205

Review 3.  The mystery of oxygen evolution: analysis of structure and function of photosystem II, the water-plastoquinone oxido-reductase.

Authors:  M K Raval; B Biswal; U C Biswal
Journal:  Photosynth Res       Date:  2005-09       Impact factor: 3.573

Review 4.  Light-induced FTIR difference spectroscopy as a powerful tool toward understanding the molecular mechanism of photosynthetic oxygen evolution.

Authors:  Takumi Noguchi
Journal:  Photosynth Res       Date:  2007-02-06       Impact factor: 3.573

5.  Protein Ligation of the Photosynthetic Oxygen-Evolving Center.

Authors:  Richard J Debus
Journal:  Coord Chem Rev       Date:  2008-02       Impact factor: 22.315

Review 6.  Fourier transform infrared (FTIR) spectroscopy.

Authors:  Catherine Berthomieu; Rainer Hienerwadel
Journal:  Photosynth Res       Date:  2009-06-10       Impact factor: 3.573

7.  A hydrogen-bonding network plays a catalytic role in photosynthetic oxygen evolution.

Authors:  Brandon C Polander; Bridgette A Barry
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

8.  Evidence from FTIR difference spectroscopy of an extensive network of hydrogen bonds near the oxygen-evolving Mn(4)Ca cluster of photosystem II involving D1-Glu65, D2-Glu312, and D1-Glu329.

Authors:  Rachel J Service; Warwick Hillier; Richard J Debus
Journal:  Biochemistry       Date:  2010-08-10       Impact factor: 3.162

9.  D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine YZ for proton exit during water oxidation.

Authors:  Ryo Nagao; Hanayo Ueoka-Nakanishi; Takumi Noguchi
Journal:  J Biol Chem       Date:  2017-10-18       Impact factor: 5.157

10.  Glutamate-354 of the CP43 polypeptide interacts with the oxygen-evolving Mn4Ca cluster of photosystem II: a preliminary characterization of the Glu354Gln mutant.

Authors:  Melodie A Strickler; Hong Jin Hwang; Robert L Burnap; Junko Yano; Lee M Walker; Rachel J Service; R David Britt; Warwick Hillier; Richard J Debus
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-03-27       Impact factor: 6.237

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