Literature DB >> 12727515

The chemistry of protein synthesis and voyage through the ribosomal tunnel.

Simon Jenni1, Nenad Ban.   

Abstract

High-resolution structures of ribosomal subunits and their complexes with substrates and antibiotics have revealed fundamental principles of template-directed protein synthesis. Mechanistic questions regarding ribosome function and catalysis can now be addressed with structure-based experiments. Recent studies have investigated the mechanism of peptide bond formation catalyzed by the large ribosomal subunit, the mode of protein synthesis inhibition by macrolide antibiotics, the interaction of nascent polypeptides with the ribosomal exit tunnel, and the role of ribosomal proteins in the recruitment of accessory factors that assist protein folding and targeting.

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Year:  2003        PMID: 12727515     DOI: 10.1016/s0959-440x(03)00034-4

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  20 in total

1.  Translation arrest of SecM is essential for the basal and regulated expression of SecA.

Authors:  Akiko Murakami; Hitoshi Nakatogawa; Koreaki Ito
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-09       Impact factor: 11.205

2.  A nascent polypeptide domain that can regulate translation elongation.

Authors:  Peng Fang; Christina C Spevak; Cheng Wu; Matthew S Sachs
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-12       Impact factor: 11.205

3.  The key function of a conserved and modified rRNA residue in the ribosomal response to the nascent peptide.

Authors:  Nora Vázquez-Laslop; Haripriya Ramu; Dorota Klepacki; Krishna Kannan; Alexander S Mankin
Journal:  EMBO J       Date:  2010-07-30       Impact factor: 11.598

4.  Structure of the mammalian 80S ribosome at 8.7 A resolution.

Authors:  Preethi Chandramouli; Maya Topf; Jean-François Ménétret; Narayanan Eswar; Jamie J Cannone; Robin R Gutell; Andrej Sali; Christopher W Akey
Journal:  Structure       Date:  2008-04       Impact factor: 5.006

Review 5.  Macrolide myths.

Authors:  Alexander S Mankin
Journal:  Curr Opin Microbiol       Date:  2008-10-03       Impact factor: 7.934

Review 6.  Protein folding and aggregation in bacteria.

Authors:  Raimon Sabate; Natalia S de Groot; Salvador Ventura
Journal:  Cell Mol Life Sci       Date:  2010-04-01       Impact factor: 9.261

7.  Changes in the level of poly(Phe) synthesis in Escherichia coli ribosomes containing mutants of L4 ribosomal protein from Thermus thermophilus can be explained by structural changes in the peptidyltransferase center: a molecular dynamics simulation analysis.

Authors:  G Papadopoulos; S Grudinin; D L Kalpaxis; T Choli-Papadopoulou
Journal:  Eur Biophys J       Date:  2006-06-14       Impact factor: 1.733

8.  Directionality in protein fold prediction.

Authors:  Jonathan J Ellis; Fabien P E Huard; Charlotte M Deane; Sheenal Srivastava; Graham R Wood
Journal:  BMC Bioinformatics       Date:  2010-04-07       Impact factor: 3.169

Review 9.  A synonymous polymorphism in a common MDR1 (ABCB1) haplotype shapes protein function.

Authors:  King Leung Fung; Michael M Gottesman
Journal:  Biochim Biophys Acta       Date:  2009-03-11

10.  Targeting of inositol 1,4,5-trisphosphate receptor to the endoplasmic reticulum by its first transmembrane domain.

Authors:  Evangelia Pantazaka; Colin W Taylor
Journal:  Biochem J       Date:  2009-12-14       Impact factor: 3.857

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