Literature DB >> 12713904

Detours and shortcuts to transcription reinitiation.

Giorgio Dieci1, André Sentenac.   

Abstract

Gene transcription is repetitive, enabling the synthesis of multiple copies of identical RNA molecules from the same template. The cyclic process of RNA synthesis from active genes, referred to as transcription reinitiation, contributes significantly to the level of RNAs in living cells. Contrary to the perception that multiple transcription cycles are a mere iteration of mechanistically identical steps, a large body of evidence indicates that, in most transcription systems, reinitiation involves highly specific and regulated pathways. These pathways influence the availability for reinitiation of template DNA and/or transcription proteins, and represent an important yet poorly characterized aspect of gene regulation.

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Year:  2003        PMID: 12713904     DOI: 10.1016/S0968-0004(03)00054-9

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  35 in total

1.  The RNA polymerase III transcriptome revealed by genome-wide localization and activity-occupancy relationships.

Authors:  Douglas N Roberts; Allen J Stewart; Jason T Huff; Bradley R Cairns
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-21       Impact factor: 11.205

2.  Formation of an active tissue-specific chromatin domain initiated by epigenetic marking at the embryonic stem cell stage.

Authors:  Henrietta Szutorisz; Claudia Canzonetta; Andrew Georgiou; Cheok-Man Chow; László Tora; Niall Dillon
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

3.  A role for the CPF 3'-end processing machinery in RNAP II-dependent gene looping.

Authors:  Athar Ansari; Michael Hampsey
Journal:  Genes Dev       Date:  2005-11-30       Impact factor: 11.361

4.  Combinatorial Gene Regulation through Kinetic Control of the Transcription Cycle.

Authors:  Clarissa Scholes; Angela H DePace; Álvaro Sánchez
Journal:  Cell Syst       Date:  2016-12-29       Impact factor: 10.304

5.  Requirement of Nhp6 proteins for transcription of a subset of tRNA genes and heterochromatin barrier function in Saccharomyces cerevisiae.

Authors:  Priscilla Braglia; Sandra L Dugas; David Donze; Giorgio Dieci
Journal:  Mol Cell Biol       Date:  2006-12-18       Impact factor: 4.272

6.  Genome-wide location analysis reveals a role for Sub1 in RNA polymerase III transcription.

Authors:  Arounie Tavenet; Audrey Suleau; Géraldine Dubreuil; Roberto Ferrari; Cécile Ducrot; Magali Michaut; Jean-Christophe Aude; Giorgio Dieci; Olivier Lefebvre; Christine Conesa; Joël Acker
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-11       Impact factor: 11.205

7.  Gene looping is conferred by activator-dependent interaction of transcription initiation and termination machineries.

Authors:  Belal El Kaderi; Scott Medler; Sarita Raghunayakula; Athar Ansari
Journal:  J Biol Chem       Date:  2009-07-14       Impact factor: 5.157

8.  Transcriptional interference by RNA polymerase pausing and dislodgement of transcription factors.

Authors:  Adam C Palmer; J Barry Egan; Keith E Shearwin
Journal:  Transcription       Date:  2011 Jan-Feb

9.  Evidence for a complex of transcription factor IIB with poly(A) polymerase and cleavage factor 1 subunits required for gene looping.

Authors:  Scott Medler; Nadra Al Husini; Sarita Raghunayakula; Banupriya Mukundan; Ashley Aldea; Athar Ansari
Journal:  J Biol Chem       Date:  2011-08-11       Impact factor: 5.157

10.  Determinants of Replication-Fork Pausing at tRNA Genes in Saccharomyces cerevisiae.

Authors:  Rani Yeung; Duncan J Smith
Journal:  Genetics       Date:  2020-02-18       Impact factor: 4.562

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