Literature DB >> 12711392

Rice UV-damaged DNA binding protein homologues are most abundant in proliferating tissues.

Toyotaka Ishibashi1, Seisuke Kimura, Taichi Yamamoto, Tomoyuki Furukawa, Kei-ichi Takata, Yukinobu Uchiyama, Junji Hashimoto, Kengo Sakaguchi.   

Abstract

Ultraviolet-damaged DNA binding protein (UV-DDB) is an important factor involved in DNA repair. To study the role of UV-DDB, we attempted to obtain the cDNA and the protein of a plant UV-DDB. We succeeded in isolating both genes for UV-DDB subunits from rice (Oryza sativa cv. Nipponbare), designated as OsUV-DDB1 and OsUV-DDB2. OsUV-DDB2 (65 kDa) was much larger than human UV-DDB2, but immunoprecipitation and gel mobility shift assay suggested that OsUV-DDB2 is a plant counterpart of UV-DDB2. The transcripts were expressed in proliferating tissues such as the meristem, but were detected at only low levels in the mature leaves, although the leaves are strongly exposed to UV. These transcripts were induced in the meristem after UV-irradiation. The expression levels of OsUV-DDB were significantly reduced when cell proliferation was temporarily halted. These results indicated that the level of OsUV-DDB expression is correlated with cell proliferation, and its expression may be required mostly for DNA repair in DNA replication.

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Year:  2003        PMID: 12711392     DOI: 10.1016/s0378-1119(03)00447-5

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  15 in total

1.  Characterization of T-DNA insertion mutants and RNAi silenced plants of Arabidopsis thaliana UV-damaged DNA binding protein 2 (AtUV-DDB2).

Authors:  Asami Koga; Toyotaka Ishibashi; Seisuke Kimura; Yukinobu Uchiyama; Kengo Sakaguchi
Journal:  Plant Mol Biol       Date:  2006-05       Impact factor: 4.076

2.  DDB2, DDB1A and DET1 exhibit complex interactions during Arabidopsis development.

Authors:  Wesam M Al Khateeb; Dana F Schroeder
Journal:  Genetics       Date:  2007-04-03       Impact factor: 4.562

3.  Overexpression of Arabidopsis damaged DNA binding protein 1A (DDB1A) enhances UV tolerance.

Authors:  Wesam M Al Khateeb; Dana F Schroeder
Journal:  Plant Mol Biol       Date:  2009-03-14       Impact factor: 4.076

4.  The De-Etiolated 1 Homolog of Arabidopsis Modulates the ABA Signaling Pathway and ABA Biosynthesis in Rice.

Authors:  Guangchao Zang; Hanyan Zou; Yuchan Zhang; Zheng Xiang; Junli Huang; Li Luo; Chunping Wang; Kairong Lei; Xianyong Li; Deming Song; Ahmad Ud Din; Guixue Wang
Journal:  Plant Physiol       Date:  2016-05-02       Impact factor: 8.340

5.  Arabidopsis COP10 forms a complex with DDB1 and DET1 in vivo and enhances the activity of ubiquitin conjugating enzymes.

Authors:  Yuki Yanagawa; James A Sullivan; Setsuko Komatsu; Giuliana Gusmaroli; Genki Suzuki; Jianning Yin; Toyotaka Ishibashi; Yusuke Saijo; Vicente Rubio; Seisuke Kimura; Jian Wang; Xing Wang Deng
Journal:  Genes Dev       Date:  2004-09-01       Impact factor: 11.361

6.  Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase lambda and RPA subunit proteins, is involved in cell proliferation.

Authors:  Tomoyuki Furukawa; Tomohiro Imamura; Hiroko K Kitamoto; Hiroaki Shimada
Journal:  Plant Mol Biol       Date:  2008-01-18       Impact factor: 4.076

7.  Functional characterization of the putative Aspergillus nidulans DNA damage binding protein homologue DdbA.

Authors:  Joel Fernandes Lima; Iran Malavazi; Márcia Eliana da Silva Ferreira; Marcela Savoldi; André Oliveira Mota; José Luiz Capellaro; Maria Helena de Souza Goldman; Gustavo Henrique Goldman
Journal:  Mol Genet Genomics       Date:  2007-11-30       Impact factor: 3.291

8.  The tomato homolog of the gene encoding UV-damaged DNA binding protein 1 (DDB1) underlined as the gene that causes the high pigment-1 mutant phenotype.

Authors:  Michal Lieberman; Orit Segev; Nehama Gilboa; Avraham Lalazar; Ilan Levin
Journal:  Theor Appl Genet       Date:  2004-02-14       Impact factor: 5.699

9.  DNA repair in higher plants; photoreactivation is the major DNA repair pathway in non-proliferating cells while excision repair (nucleotide excision repair and base excision repair) is active in proliferating cells.

Authors:  Seisuke Kimura; Yasue Tahira; Toyotaka Ishibashi; Yoko Mori; Toshio Mori; Junji Hashimoto; Kengo Sakaguchi
Journal:  Nucleic Acids Res       Date:  2004-05-18       Impact factor: 16.971

10.  Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes.

Authors:  Yu Zhang; Suhua Feng; Fangfang Chen; Haodong Chen; Jia Wang; Chad McCall; Yue Xiong; Xing Wang Deng
Journal:  Plant Cell       Date:  2008-06-13       Impact factor: 11.277

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