Literature DB >> 12702691

Regulating general mutation rates: examination of the hypermutable state model for Cairnsian adaptive mutation.

John R Roth1, Eric Kofoid, Frederick P Roth, Otto G Berg, Jon Seger, Dan I Andersson.   

Abstract

In the lac adaptive mutation system of Cairns, selected mutant colonies but not unselected mutant types appear to arise from a nongrowing population of Escherichia coli. The general mutagenesis suffered by the selected mutants has been interpreted as support for the idea that E. coli possesses an evolved (and therefore beneficial) mechanism that increases the mutation rate in response to stress (the hypermutable state model, HSM). This mechanism is proposed to allow faster genetic adaptation to stressful conditions and to explain why mutations appear directed to useful sites. Analysis of the HSM reveals that it requires implausibly intense mutagenesis (10(5) times the unselected rate) and even then cannot account for the behavior of the Cairns system. The assumptions of the HSM predict that selected revertants will carry an average of eight deleterious null mutations and thus seem unlikely to be successful in long-term evolution. The experimentally observed 35-fold increase in the level of general mutagenesis cannot account for even one Lac(+) revertant from a mutagenized subpopulation of 10(5) cells (the number proposed to enter the hypermutable state). We conclude that temporary general mutagenesis during stress is unlikely to provide a long-term selective advantage in this or any similar genetic system.

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Year:  2003        PMID: 12702691      PMCID: PMC1462528     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  33 in total

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Journal:  Curr Opin Genet Dev       Date:  1992-12       Impact factor: 5.578

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Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-15       Impact factor: 11.205

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Journal:  Science       Date:  1993-01-08       Impact factor: 47.728

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Journal:  Nature       Date:  1997-06-12       Impact factor: 49.962

5.  Spontaneous point mutations that occur more often when advantageous than when neutral.

Authors:  B G Hall
Journal:  Genetics       Date:  1990-09       Impact factor: 4.562

6.  A ruby in the rubbish: beneficial mutations, deleterious mutations and the evolution of sex.

Authors:  J R Peck
Journal:  Genetics       Date:  1994-06       Impact factor: 4.562

7.  Adaptive reversion of a frameshift mutation in Escherichia coli by simple base deletions in homopolymeric runs.

Authors:  P L Foster; J M Trimarchi
Journal:  Science       Date:  1994-07-15       Impact factor: 47.728

8.  Adaptive mutation by deletions in small mononucleotide repeats.

Authors:  S M Rosenberg; S Longerich; P Gee; R S Harris
Journal:  Science       Date:  1994-07-15       Impact factor: 47.728

9.  Population dynamics of a Lac- strain of Escherichia coli during selection for lactose utilization.

Authors:  P L Foster
Journal:  Genetics       Date:  1994-10       Impact factor: 4.562

10.  Mechanisms of directed mutation.

Authors:  P L Foster; J Cairns
Journal:  Genetics       Date:  1992-08       Impact factor: 4.562

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  26 in total

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Authors:  E Susan Slechta; Kim L Bunny; Elisabeth Kugelberg; Eric Kofoid; Dan I Andersson; John R Roth
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-14       Impact factor: 11.205

2.  Adaptive mutation: how growth under selection stimulates Lac(+) reversion by increasing target copy number.

Authors:  John R Roth; Dan I Andersson
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

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Journal:  Cold Spring Harb Perspect Biol       Date:  2015-09-01       Impact factor: 10.005

5.  Salvador Luria and Max Delbrück on Random Mutation and Fluctuation Tests.

Authors:  Andrew Murray
Journal:  Genetics       Date:  2016-02       Impact factor: 4.562

6.  The amplification model for adaptive mutation: simulations and analysis.

Authors:  Mats E Pettersson; Dan I Andersson; John R Roth; Otto G Berg
Journal:  Genetics       Date:  2004-10-16       Impact factor: 4.562

Review 7.  Stress-induced mutagenesis in bacteria.

Authors:  Patricia L Foster
Journal:  Crit Rev Biochem Mol Biol       Date:  2007 Sep-Oct       Impact factor: 8.250

8.  Accumulation of mutants in "aging" bacterial colonies is due to growth under selection, not stress-induced mutagenesis.

Authors:  Marie Wrande; John R Roth; Diarmaid Hughes
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-13       Impact factor: 11.205

Review 9.  An evolutionary view of plant tissue culture: somaclonal variation and selection.

Authors:  Qin-Mei Wang; Li Wang
Journal:  Plant Cell Rep       Date:  2012-05-19       Impact factor: 4.570

10.  The tandem inversion duplication in Salmonella enterica: selection drives unstable precursors to final mutation types.

Authors:  Elisabeth Kugelberg; Eric Kofoid; Dan I Andersson; Yong Lu; Joseph Mellor; Frederick P Roth; John R Roth
Journal:  Genetics       Date:  2010-03-09       Impact factor: 4.562

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