Literature DB >> 12697827

Transcription factor IIB (TFIIB)-related protein (pBrp), a plant-specific member of the TFIIB-related protein family.

Thierry Lagrange1, Mohamed-Ali Hakimi, Dominique Pontier, Florence Courtois, Jean Pierre Alcaraz, Didier Grunwald, Eric Lam, Silva Lerbs-Mache.   

Abstract

Although it is now well documented that metazoans have evolved general transcription factor (GTF) variants to regulate their complex patterns of gene expression, there is so far no information regarding the existence of specific GTFs in plants. Here we report the characterization of a ubiquitously expressed gene that encodes a bona fide novel transcription factor IIB (TFIIB)-related protein in Arabidopsis thaliana. We have shown that this protein is the founding member of a plant-specific TFIIB-related protein family named pBrp (for plant-specific TFIIB-related protein). Surprisingly, in contrast to common GTFs that are localized in the nucleus, the bulk of pBrp proteins are bound to the cytoplasmic face of the plastid envelope, suggesting an organelle-specific function for this novel class of TFIIB-related protein. We show that pBrp proteins harbor conditional proteolytic signals that can target these proteins for rapid turnover by the proteasome-mediated protein degradation pathway. Interestingly, under conditions of proteasome inhibition, pBrp proteins accumulate in the nucleus. Together, our results suggest a possible involvement of these proteins in an intracellular signaling pathway between plastids and the nucleus. Our data provide the first evidence for an organelle-related evolution of the eukaryotic general transcription machinery.

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Year:  2003        PMID: 12697827      PMCID: PMC153204          DOI: 10.1128/MCB.23.9.3274-3286.2003

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  80 in total

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Journal:  Science       Date:  2001-05-03       Impact factor: 47.728

2.  ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites.

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3.  Gene transfer from organelles to the nucleus: how much, what happens, and Why?

Authors: 
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4.  New core promoter element in RNA polymerase II-dependent transcription: sequence-specific DNA binding by transcription factor IIB.

Authors:  T Lagrange; A N Kapanidis; H Tang; D Reinberg; R H Ebright
Journal:  Genes Dev       Date:  1998-01-01       Impact factor: 11.361

5.  The nuclear RPL4 gene encodes a chloroplast protein that co-purifies with the T7-like transcription complex as well as plastid ribosomes.

Authors:  Y Trifa; I Privat; J Gagnon; L Baeza; S Lerbs-Mache
Journal:  J Biol Chem       Date:  1998-02-13       Impact factor: 5.157

6.  Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.

Authors:  K Mayer; C Schüller; R Wambutt; G Murphy; G Volckaert; T Pohl; A Düsterhöft; W Stiekema; K D Entian; N Terryn; B Harris; W Ansorge; P Brandt; L Grivell; M Rieger; M Weichselgartner; V de Simone; B Obermaier; R Mache; M Müller; M Kreis; M Delseny; P Puigdomenech; M Watson; T Schmidtheini; B Reichert; D Portatelle; M Perez-Alonso; M Boutry; I Bancroft; P Vos; J Hoheisel; W Zimmermann; H Wedler; P Ridley; S A Langham; B McCullagh; L Bilham; J Robben; J Van der Schueren; B Grymonprez; Y J Chuang; F Vandenbussche; M Braeken; I Weltjens; M Voet; I Bastiaens; R Aert; E Defoor; T Weitzenegger; G Bothe; U Ramsperger; H Hilbert; M Braun; E Holzer; A Brandt; S Peters; M van Staveren; W Dirske; P Mooijman; R Klein Lankhorst; M Rose; J Hauf; P Kötter; S Berneiser; S Hempel; M Feldpausch; S Lamberth; H Van den Daele; A De Keyser; C Buysshaert; J Gielen; R Villarroel; R De Clercq; M Van Montagu; J Rogers; A Cronin; M Quail; S Bray-Allen; L Clark; J Doggett; S Hall; M Kay; N Lennard; K McLay; R Mayes; A Pettett; M A Rajandream; M Lyne; V Benes; S Rechmann; D Borkova; H Blöcker; M Scharfe; M Grimm; T H Löhnert; S Dose; M de Haan; A Maarse; M Schäfer; S Müller-Auer; C Gabel; M Fuchs; B Fartmann; K Granderath; D Dauner; A Herzl; S Neumann; A Argiriou; D Vitale; R Liguori; E Piravandi; O Massenet; F Quigley; G Clabauld; A Mündlein; R Felber; S Schnabl; R Hiller; W Schmidt; A Lecharny; S Aubourg; F Chefdor; R Cooke; C Berger; A Montfort; E Casacuberta; T Gibbons; N Weber; M Vandenbol; M Bargues; J Terol; A Torres; A Perez-Perez; B Purnelle; E Bent; S Johnson; D Tacon; T Jesse; L Heijnen; S Schwarz; P Scholler; S Heber; P Francs; C Bielke; D Frishman; D Haase; K Lemcke; H W Mewes; S Stocker; P Zaccaria; M Bevan; R K Wilson; M de la Bastide; K Habermann; L Parnell; N Dedhia; L Gnoj; K Schutz; E Huang; L Spiegel; M Sehkon; J Murray; P Sheet; M Cordes; J Abu-Threideh; T Stoneking; J Kalicki; T Graves; G Harmon; J Edwards; P Latreille; L Courtney; J Cloud; A Abbott; K Scott; D Johnson; P Minx; D Bentley; B Fulton; N Miller; T Greco; K Kemp; J Kramer; L Fulton; E Mardis; M Dante; K Pepin; L Hillier; J Nelson; J Spieth; E Ryan; S Andrews; C Geisel; D Layman; H Du; J Ali; A Berghoff; K Jones; K Drone; M Cotton; C Joshu; B Antonoiu; M Zidanic; C Strong; H Sun; B Lamar; C Yordan; P Ma; J Zhong; R Preston; D Vil; M Shekher; A Matero; R Shah; I K Swaby; A O'Shaughnessy; M Rodriguez; J Hoffmann; S Till; S Granat; N Shohdy; A Hasegawa; A Hameed; M Lodhi; A Johnson; E Chen; M Marra; R Martienssen; W R McCombie
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

7.  Requirement of tissue-selective TBP-associated factor TAFII105 in ovarian development.

Authors:  R N Freiman; S R Albright; S Zheng; W C Sha; R E Hammer; R Tjian
Journal:  Science       Date:  2001-09-14       Impact factor: 47.728

8.  Isolation and properties of the envelope of spinach chloroplasts.

Authors:  R Douce; R B Holtz; A A Benson
Journal:  J Biol Chem       Date:  1973-10-25       Impact factor: 5.157

9.  G-protein signaling through tubby proteins.

Authors:  S Santagata; T J Boggon; C L Baird; C A Gomez; J Zhao; W S Shan; D G Myszka; L Shapiro
Journal:  Science       Date:  2001-05-24       Impact factor: 47.728

10.  SREBP-1, a membrane-bound transcription factor released by sterol-regulated proteolysis.

Authors:  X Wang; R Sato; M S Brown; X Hua; J L Goldstein
Journal:  Cell       Date:  1994-04-08       Impact factor: 41.582

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  16 in total

1.  Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis.

Authors:  Dominique Pontier; Galina Yahubyan; Danielle Vega; Agnès Bulski; Julio Saez-Vasquez; Mohamed-Ali Hakimi; Silva Lerbs-Mache; Vincent Colot; Thierry Lagrange
Journal:  Genes Dev       Date:  2005-09-01       Impact factor: 11.361

2.  Cell and plastid division are coordinated through the prereplication factor AtCDT1.

Authors:  Cécile Raynaud; Claudette Perennes; Christophe Reuzeau; Olivier Catrice; Spencer Brown; Catherine Bergounioux
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-31       Impact factor: 11.205

3.  Phage-type RNA polymerase RPOTmp transcribes the rrn operon from the PC promoter at early developmental stages in Arabidopsis.

Authors:  Florence Courtois; Livia Merendino; Emilie Demarsy; Régis Mache; Silva Lerbs-Mache
Journal:  Plant Physiol       Date:  2007-09-20       Impact factor: 8.340

4.  The plant-specific TFIIB-related protein, pBrp, is a general transcription factor for RNA polymerase I.

Authors:  Sousuke Imamura; Mitsumasa Hanaoka; Kan Tanaka
Journal:  EMBO J       Date:  2008-09-03       Impact factor: 11.598

5.  Nuclear targeted AtS40 modulates senescence associated gene expression in Arabidopsis thaliana during natural development and in darkness.

Authors:  Isabell Fischer-Kilbienski; Ying Miao; Thomas Roitsch; Wiebke Zschiesche; Klaus Humbeck; Karin Krupinska
Journal:  Plant Mol Biol       Date:  2010-03-19       Impact factor: 4.076

6.  Light and Plastid Signals Regulate Different Sets of Genes in the Albino Mutant Pap7-1.

Authors:  Björn Grübler; Livia Merendino; Sven O Twardziok; Morgane Mininno; Guillaume Allorent; Fabien Chevalier; Monique Liebers; Robert Blanvillain; Klaus F X Mayer; Silva Lerbs-Mache; Stéphane Ravanel; Thomas Pfannschmidt
Journal:  Plant Physiol       Date:  2017-09-21       Impact factor: 8.340

Review 7.  TFIIB-related factors in RNA polymerase I transcription.

Authors:  Bruce A Knutson; Steven Hahn
Journal:  Biochim Biophys Acta       Date:  2012-08-30

8.  Emergence and expansion of TFIIB-like factors in the plant kingdom.

Authors:  Bruce A Knutson
Journal:  Gene       Date:  2013-04-20       Impact factor: 3.688

9.  Dual localized mitochondrial and nuclear proteins as gene expression regulators in plants?

Authors:  Anne-Marie Duchêne; Philippe Giegé
Journal:  Front Plant Sci       Date:  2012-09-25       Impact factor: 5.753

10.  A plant-specific transcription factor IIB-related protein, pBRP2, is involved in endosperm growth control.

Authors:  Emilie Cavel; Marion Pillot; Dominique Pontier; Sylvie Lahmy; Natacha Bies-Etheve; Danielle Vega; Daniel Grimanelli; Thierry Lagrange
Journal:  PLoS One       Date:  2011-02-24       Impact factor: 3.240

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