Literature DB >> 12690205

Human chromosome 7: DNA sequence and biology.

Stephen W Scherer1, Joseph Cheung, Jeffrey R MacDonald, Lucy R Osborne, Kazuhiko Nakabayashi, Jo-Anne Herbrick, Andrew R Carson, Layla Parker-Katiraee, Jennifer Skaug, Razi Khaja, Junjun Zhang, Alexander K Hudek, Martin Li, May Haddad, Gavin E Duggan, Bridget A Fernandez, Emiko Kanematsu, Simone Gentles, Constantine C Christopoulos, Sanaa Choufani, Dorota Kwasnicka, Xiangqun H Zheng, Zhongwu Lai, Deborah Nusskern, Qing Zhang, Zhiping Gu, Fu Lu, Susan Zeesman, Malgorzata J Nowaczyk, Ikuko Teshima, David Chitayat, Cheryl Shuman, Rosanna Weksberg, Elaine H Zackai, Theresa A Grebe, Sarah R Cox, Susan J Kirkpatrick, Nazneen Rahman, Jan M Friedman, Henry H Q Heng, Pier Giuseppe Pelicci, Francesco Lo-Coco, Elena Belloni, Lisa G Shaffer, Barbara Pober, Cynthia C Morton, James F Gusella, Gail A P Bruns, Bruce R Korf, Bradley J Quade, Azra H Ligon, Heather Ferguson, Anne W Higgins, Natalia T Leach, Steven R Herrick, Emmanuelle Lemyre, Chantal G Farra, Hyung-Goo Kim, Anne M Summers, Karen W Gripp, Wendy Roberts, Peter Szatmari, Elizabeth J T Winsor, Karl-Heinz Grzeschik, Ahmed Teebi, Berge A Minassian, Juha Kere, Lluis Armengol, Miguel Angel Pujana, Xavier Estivill, Michael D Wilson, Ben F Koop, Sabrina Tosi, Gudrun E Moore, Andrew P Boright, Eitan Zlotorynski, Batsheva Kerem, Peter M Kroisel, Erwin Petek, David G Oscier, Sarah J Mould, Hartmut Döhner, Konstanze Döhner, Johanna M Rommens, John B Vincent, J Craig Venter, Peter W Li, Richard J Mural, Mark D Adams, Lap-Chee Tsui.   

Abstract

DNA sequence and annotation of the entire human chromosome 7, encompassing nearly 158 million nucleotides of DNA and 1917 gene structures, are presented. To generate a higher order description, additional structural features such as imprinted genes, fragile sites, and segmental duplications were integrated at the level of the DNA sequence with medical genetic data, including 440 chromosome rearrangement breakpoints associated with disease. This approach enabled the discovery of candidate genes for developmental diseases including autism.

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Year:  2003        PMID: 12690205      PMCID: PMC2882961          DOI: 10.1126/science.1083423

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  29 in total

1.  Analysis of the monomeric alphoid sequences in the pericentromeric region of human chromosome 7.

Authors:  A de la Puente; E Velasco; L A Pérez Jurado; C Hernández-Chico; F M van de Rijke; S W Scherer; A K Raap; J Cruces
Journal:  Cytogenet Cell Genet       Date:  1998

2.  A 1.5 million-base pair inversion polymorphism in families with Williams-Beuren syndrome.

Authors:  L R Osborne; M Li; B Pober; D Chitayat; J Bodurtha; A Mandel; T Costa; T Grebe; S Cox; L C Tsui; S W Scherer
Journal:  Nat Genet       Date:  2001-11       Impact factor: 38.330

3.  Recent segmental duplications in the human genome.

Authors:  Jeffrey A Bailey; Zhiping Gu; Royden A Clark; Knut Reinert; Rhea V Samonte; Stuart Schwartz; Mark D Adams; Eugene W Myers; Peter W Li; Evan E Eichler
Journal:  Science       Date:  2002-08-09       Impact factor: 47.728

4.  The generic genome browser: a building block for a model organism system database.

Authors:  Lincoln D Stein; Christopher Mungall; ShengQiang Shu; Michael Caudy; Marco Mangone; Allen Day; Elizabeth Nickerson; Jason E Stajich; Todd W Harris; Adrian Arva; Suzanna Lewis
Journal:  Genome Res       Date:  2002-10       Impact factor: 9.043

5.  The Dlx5 and Dlx6 homeobox genes are essential for craniofacial, axial, and appendicular skeletal development.

Authors:  Raymond F Robledo; Lakshmi Rajan; Xue Li; Thomas Lufkin
Journal:  Genes Dev       Date:  2002-05-01       Impact factor: 11.361

6.  A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Authors:  C Dib; S Fauré; C Fizames; D Samson; N Drouot; A Vignal; P Millasseau; S Marc; J Hazan; E Seboun; M Lathrop; G Gyapay; J Morissette; J Weissenbach
Journal:  Nature       Date:  1996-03-14       Impact factor: 49.962

7.  Physical map of the centromeric region of human chromosome 7: relationship between two distinct alpha satellite arrays.

Authors:  R Wevrick; H F Willard
Journal:  Nucleic Acids Res       Date:  1991-05-11       Impact factor: 16.971

8.  A forkhead-domain gene is mutated in a severe speech and language disorder.

Authors:  C S Lai; S E Fisher; J A Hurst; F Vargha-Khadem; A P Monaco
Journal:  Nature       Date:  2001-10-04       Impact factor: 49.962

9.  Physical mapping of the split hand/split foot locus on chromosome 7 and implication in syndromic ectrodactyly.

Authors:  S W Scherer; P Poorkaj; H Massa; S Soder; T Allen; M Nunes; D Geshuri; E Wong; E Belloni; S Little
Journal:  Hum Mol Genet       Date:  1994-08       Impact factor: 6.150

10.  Mouse model of split hand/foot malformation type I.

Authors:  Giorgio R Merlo; Laura Paleari; Stefano Mantero; Francesca Genova; Annemiek Beverdam; Giulio L Palmisano; Ottavia Barbieri; Giovanni Levi
Journal:  Genesis       Date:  2002-06       Impact factor: 2.487

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  60 in total

1.  Functional expression of novel human and murine AKR1B genes.

Authors:  Joshua K Salabei; Xiao-Ping Li; J Mark Petrash; Aruni Bhatnagar; Oleg A Barski
Journal:  Chem Biol Interact       Date:  2011-01-27       Impact factor: 5.192

2.  Increased risk for developmental delay in Saethre-Chotzen syndrome is associated with TWIST deletions: an improved strategy for TWIST mutation screening.

Authors:  Juanliang Cai; Barbara K Goodman; Ankita S Patel; John B Mulliken; Lionel Van Maldergem; George E Hoganson; William A Paznekas; Ziva Ben-Neriah; Ruth Sheffer; Michael L Cunningham; Donna L Daentl; Ethylin Wang Jabs
Journal:  Hum Genet       Date:  2003-09-25       Impact factor: 4.132

3.  Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse.

Authors:  Tao Xie; Lee Rowen; Begoña Aguado; Mary Ellen Ahearn; Anup Madan; Shizhen Qin; R Duncan Campbell; Leroy Hood
Journal:  Genome Res       Date:  2003-12       Impact factor: 9.043

4.  Genome assembly comparison identifies structural variants in the human genome.

Authors:  Razi Khaja; Junjun Zhang; Jeffrey R MacDonald; Yongshu He; Ann M Joseph-George; John Wei; Muhammad A Rafiq; Cheng Qian; Mary Shago; Lorena Pantano; Hiroyuki Aburatani; Keith Jones; Richard Redon; Matthew Hurles; Lluis Armengol; Xavier Estivill; Richard J Mural; Charles Lee; Stephen W Scherer; Lars Feuk
Journal:  Nat Genet       Date:  2006-11-22       Impact factor: 38.330

5.  Gene discovery at the human T-cell receptor alpha/delta locus.

Authors:  Marsha R Haynes; Gillian E Wu
Journal:  Immunogenetics       Date:  2006-12-13       Impact factor: 2.846

6.  Copy number variation at the 7q11.23 segmental duplications is a susceptibility factor for the Williams-Beuren syndrome deletion.

Authors:  Ivon Cuscó; Roser Corominas; Mònica Bayés; Raquel Flores; Núria Rivera-Brugués; Victoria Campuzano; Luis A Pérez-Jurado
Journal:  Genome Res       Date:  2008-02-21       Impact factor: 9.043

7.  Structural variation of chromosomes in autism spectrum disorder.

Authors:  Christian R Marshall; Abdul Noor; John B Vincent; Anath C Lionel; Lars Feuk; Jennifer Skaug; Mary Shago; Rainald Moessner; Dalila Pinto; Yan Ren; Bhooma Thiruvahindrapduram; Andreas Fiebig; Stefan Schreiber; Jan Friedman; Cees E J Ketelaars; Yvonne J Vos; Can Ficicioglu; Susan Kirkpatrick; Rob Nicolson; Leon Sloman; Anne Summers; Clare A Gibbons; Ahmad Teebi; David Chitayat; Rosanna Weksberg; Ann Thompson; Cathy Vardy; Vicki Crosbie; Sandra Luscombe; Rebecca Baatjes; Lonnie Zwaigenbaum; Wendy Roberts; Bridget Fernandez; Peter Szatmari; Stephen W Scherer
Journal:  Am J Hum Genet       Date:  2008-01-17       Impact factor: 11.025

8.  Contribution of SHANK3 mutations to autism spectrum disorder.

Authors:  Rainald Moessner; Christian R Marshall; James S Sutcliffe; Jennifer Skaug; Dalila Pinto; John Vincent; Lonnie Zwaigenbaum; Bridget Fernandez; Wendy Roberts; Peter Szatmari; Stephen W Scherer
Journal:  Am J Hum Genet       Date:  2007-10-16       Impact factor: 11.025

9.  Infantile spasms is associated with deletion of the MAGI2 gene on chromosome 7q11.23-q21.11.

Authors:  Christian R Marshall; Edwin J Young; Ariel M Pani; Mary-Louise Freckmann; Yves Lacassie; Cédric Howald; Kristi K Fitzgerald; Maarit Peippo; Colleen A Morris; Kate Shane; Manuela Priolo; Masafumi Morimoto; Ikuko Kondo; Esra Manguoglu; Sibel Berker-Karauzum; Patrick Edery; Holly H Hobart; Carolyn B Mervis; Orsetta Zuffardi; Alexandre Reymond; Paige Kaplan; May Tassabehji; Ronald G Gregg; Stephen W Scherer; Lucy R Osborne
Journal:  Am J Hum Genet       Date:  2008-06-19       Impact factor: 11.025

10.  Differential decay of parent-of-origin-specific genomic sharing in cystic fibrosis-affected sib pairs maps a paternally imprinted locus to 7q34.

Authors:  Frauke Stanke; Colin Davenport; Silke Hedtfeld; Burkhard Tümmler
Journal:  Eur J Hum Genet       Date:  2010-01-06       Impact factor: 4.246

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