Literature DB >> 12668454

Increased bending rigidity of single DNA molecules by H-NS, a temperature and osmolarity sensor.

Roee Amit1, Amos B Oppenheim, Joel Stavans.   

Abstract

Histonelike nucleoid structuring protein (H-NS) is an abundant prokaryotic protein participating in nucleoid structure, gene regulation, and silencing. It plays a key role in cell response to changes in temperature and osmolarity. Force-extension measurements of single, twist-relaxed lambda-DNA-H-NS complexes show that these adopt more extended configurations compared to the naked DNA substrates. Crosslinking indicates that H-NS can decorate DNA molecules at one H-NS dimer per 15-20 bp. These results suggest that H-NS polymerizes along DNA, forming a complex of higher bending rigidity. These effects are not observed above 32 degrees C or at high osmolarity, supporting the hypothesis that a direct H-NS-DNA interaction plays a key role in gene silencing. Thus, we propose that H-NS plays a unique structural role, different from that of HU and IHF, and functions as one of the environmental sensors of the cell.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12668454      PMCID: PMC1302812          DOI: 10.1016/S0006-3495(03)75051-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  33 in total

1.  Large-scale monitoring of pleiotropic regulation of gene expression by the prokaryotic nucleoid-associated protein, H-NS.

Authors:  F Hommais; E Krin; C Laurent-Winter; O Soutourina; A Malpertuy; J P Le Caer; A Danchin; P Bertin
Journal:  Mol Microbiol       Date:  2001-04       Impact factor: 3.501

2.  Control of transcription by nucleoid proteins.

Authors:  S M McLeod; R C Johnson
Journal:  Curr Opin Microbiol       Date:  2001-04       Impact factor: 7.934

3.  Structural basis for preferential binding of H-NS to curved DNA.

Authors:  R T Dame; C Wyman; N Goosen
Journal:  Biochimie       Date:  2001-02       Impact factor: 4.079

4.  Compaction of single DNA molecules induced by binding of integration host factor (IHF).

Authors:  B M Ali; R Amit; I Braslavsky; A B Oppenheim; O Gileadi; J Stavans
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-04       Impact factor: 11.205

5.  A molecular mechanism for the repression of transcription by the H-NS protein.

Authors:  S Rimsky; F Zuber; M Buckle; H Buc
Journal:  Mol Microbiol       Date:  2001-12       Impact factor: 3.501

6.  Transcriptional silencing and thermoregulation of gene expression in Escherichia coli.

Authors:  M Göransson; B Sondén; P Nilsson; B Dagberg; K Forsman; K Emanuelsson; B E Uhlin
Journal:  Nature       Date:  1990-04-12       Impact factor: 49.962

Review 7.  Histonelike proteins of bacteria.

Authors:  K Drlica; J Rouviere-Yaniv
Journal:  Microbiol Rev       Date:  1987-09

8.  Synthesis of the Escherichia coli K-12 nucleoid-associated DNA-binding protein H-NS is subjected to growth-phase control and autoregulation.

Authors:  P Dersch; K Schmidt; E Bremer
Journal:  Mol Microbiol       Date:  1993-05       Impact factor: 3.501

9.  H1a, an E. coli DNA-binding protein which accumulates in stationary phase, strongly compacts DNA in vitro.

Authors:  A Spassky; S Rimsky; H Garreau; H Buc
Journal:  Nucleic Acids Res       Date:  1984-07-11       Impact factor: 16.971

10.  The Escherichia coli nucleoid protein H-NS functions directly as a transcriptional repressor.

Authors:  C Ueguchi; T Mizuno
Journal:  EMBO J       Date:  1993-03       Impact factor: 11.598

View more
  80 in total

1.  On the role of H-NS in the organization of bacterial chromatin: from bulk to single molecules and back.

Authors:  Remus Thei Dame; Gijs J L Wuite
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Dual architectural roles of HU: formation of flexible hinges and rigid filaments.

Authors:  John van Noort; Sander Verbrugge; Nora Goosen; Cees Dekker; Remus Thei Dame
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-26       Impact factor: 11.205

3.  Single molecule elasticity measurements: a biophysical approach to bacterial nucleoid organization.

Authors:  Roee Amit; Amos B Oppenheim; Joel Stavans
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

4.  Salmonella enterica response regulator SsrB relieves H-NS silencing by displacing H-NS bound in polymerization mode and directly activates transcription.

Authors:  Don Walthers; You Li; Yingjie Liu; Ganesh Anand; Jie Yan; Linda J Kenney
Journal:  J Biol Chem       Date:  2010-11-08       Impact factor: 5.157

5.  H-NS forms a superhelical protein scaffold for DNA condensation.

Authors:  Stefan T Arold; Paul G Leonard; Gary N Parkinson; John E Ladbury
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-23       Impact factor: 11.205

Review 6.  H-NS Regulates Gene Expression and Compacts the Nucleoid: Insights from Single-Molecule Experiments.

Authors:  Ricksen S Winardhi; Jie Yan; Linda J Kenney
Journal:  Biophys J       Date:  2015-10-06       Impact factor: 4.033

7.  Bacterial luciferase activity and the intracellular redox pool in Escherichia coli.

Authors:  K Koga; T Harada; H Shimizu; K Tanaka
Journal:  Mol Genet Genomics       Date:  2005-10-11       Impact factor: 3.291

8.  H-NS is a part of a thermally controlled mechanism for bacterial gene regulation.

Authors:  Shusuke Ono; Martin D Goldberg; Tjelvar Olsson; Diego Esposito; Jay C D Hinton; John E Ladbury
Journal:  Biochem J       Date:  2005-10-15       Impact factor: 3.857

9.  Transcriptional Repressor TrmBL2 from Thermococcus kodakarensis Forms Filamentous Nucleoprotein Structures and Competes with Histones for DNA Binding in a Salt- and DNA Supercoiling-dependent Manner.

Authors:  Artem K Efremov; Yuanyuan Qu; Hugo Maruyama; Ci J Lim; Kunio Takeyasu; Jie Yan
Journal:  J Biol Chem       Date:  2015-04-30       Impact factor: 5.157

Review 10.  Engineering spatiotemporal organization and dynamics in synthetic cells.

Authors:  Alessandro Groaz; Hossein Moghimianavval; Franco Tavella; Tobias W Giessen; Anthony G Vecchiarelli; Qiong Yang; Allen P Liu
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2020-11-21
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.