Literature DB >> 12655054

Metal stoichiometry and functional studies of the diphtheria toxin repressor.

Michelle M Spiering1, Dagmar Ringe, John R Murphy, Michael A Marletta.   

Abstract

Diphtheria toxin repressor (DtxR) is a transition metal ion-activated repressor in Corynebacterium diphtheriae. DtxR is an iron sensor; metal-bound DtxR represses transcription of genes downstream of the tox operator. Wild-type DtxR [DtxR(wt)] and several mutant forms were overexpressed and purified from Escherichia coli. DtxR was isolated without bound metal. Metal reconstitution gave a binding stoichiometry of 2 per monomer for DtxR(wt) and 1 per monomer for DtxR(H79A) and DtxR(M10A). DNA binding of DtxR(H79A) and DtxR(M10A) indicates that metal site 2 is essential for activity. Metal binding lowers the dimerization K(d) of DtxR from low micromolar to 33 nM. Gel electrophoretic mobility-shift assays show that Fe(2+) and not Fe(3+) activates DtxR for DNA binding. This finding suggests that gene regulation by DtxR may be sensitive not only to iron levels but also to redox state of the iron. Mutations in the tox operator sequence indicate that DtxR dimers binding to DNA may be highly cooperative.

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Year:  2003        PMID: 12655054      PMCID: PMC153003          DOI: 10.1073/pnas.0737977100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Identification and characterization of three new promoter/operators from Corynebacterium diphtheriae that are regulated by the diphtheria toxin repressor (DtxR) and iron.

Authors:  J H Lee; T Wang; K Ault; J Liu; M P Schmitt; R K Holmes
Journal:  Infect Immun       Date:  1997-10       Impact factor: 3.441

2.  Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex.

Authors:  A White; X Ding; J C vanderSpek; J R Murphy; D Ringe
Journal:  Nature       Date:  1998-07-30       Impact factor: 49.962

3.  Characterization of lipoprotein IRP1 from Corynebacterium diphtheriae, which is regulated by the diphtheria toxin repressor (DtxR) and iron.

Authors:  M P Schmitt; B G Talley; R K Holmes
Journal:  Infect Immun       Date:  1997-12       Impact factor: 3.441

4.  CLAMP: a biosensor kinetic data analysis program.

Authors:  D G Myszka; T A Morton
Journal:  Trends Biochem Sci       Date:  1998-04       Impact factor: 13.807

5.  Comparison of high-resolution structures of the diphtheria toxin repressor in complex with cobalt and zinc at the cation-anion binding site.

Authors:  E Pohl; X Qui; L M Must; R K Holmes; W G Hol
Journal:  Protein Sci       Date:  1997-05       Impact factor: 6.725

6.  Structures of the apo- and the metal ion-activated forms of the diphtheria tox repressor from Corynebacterium diphtheriae.

Authors:  N Schiering; X Tao; H Zeng; J R Murphy; G A Petsko; D Ringe
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-10       Impact factor: 11.205

7.  Identification of the primary metal ion-activation sites of the diphtheria tox repressor by X-ray crystallography and site-directed mutational analysis.

Authors:  X Ding; H Zeng; N Schiering; D Ringe; J R Murphy
Journal:  Nat Struct Biol       Date:  1996-04

8.  Transcription of the Corynebacterium diphtheriae hmuO gene is regulated by iron and heme.

Authors:  M P Schmitt
Journal:  Infect Immun       Date:  1997-11       Impact factor: 3.441

9.  Utilization of host iron sources by Corynebacterium diphtheriae: identification of a gene whose product is homologous to eukaryotic heme oxygenases and is required for acquisition of iron from heme and hemoglobin.

Authors:  M P Schmitt
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

10.  Motion of the DNA-binding domain with respect to the core of the diphtheria toxin repressor (DtxR) revealed in the crystal structures of apo- and holo-DtxR.

Authors:  E Pohl; R K Holmes; W G Hol
Journal:  J Biol Chem       Date:  1998-08-28       Impact factor: 5.157

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  17 in total

Review 1.  Metalloregulatory proteins: metal selectivity and allosteric switching.

Authors:  Hermes Reyes-Caballero; Gregory C Campanello; David P Giedroc
Journal:  Biophys Chem       Date:  2011-04-05       Impact factor: 2.352

Review 2.  Biological inorganic chemistry at the beginning of the 21st century.

Authors:  Harry B Gray
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-25       Impact factor: 11.205

3.  The conformations of the manganese transport regulator of Bacillus subtilis in its metal-free state.

Authors:  Mark A DeWitt; Joseph I Kliegman; John D Helmann; Richard G Brennan; David L Farrens; Arthur Glasfeld
Journal:  J Mol Biol       Date:  2006-10-28       Impact factor: 5.469

4.  Backbone dynamics in an intramolecular prolylpeptide-SH3 complex from the diphtheria toxin repressor, DtxR.

Authors:  Nilakshee Bhattacharya; Myunggi Yi; Huan-Xiang Zhou; Timothy M Logan
Journal:  J Mol Biol       Date:  2007-10-31       Impact factor: 5.469

5.  Structural basis for the metal-selective activation of the manganese transport regulator of Bacillus subtilis.

Authors:  Joseph I Kliegman; Sarah L Griner; John D Helmann; Richard G Brennan; Arthur Glasfeld
Journal:  Biochemistry       Date:  2006-03-21       Impact factor: 3.162

Review 6.  Coordination chemistry of bacterial metal transport and sensing.

Authors:  Zhen Ma; Faith E Jacobsen; David P Giedroc
Journal:  Chem Rev       Date:  2009-10       Impact factor: 60.622

Review 7.  Bacterial iron detoxification at the molecular level.

Authors:  Justin M Bradley; Dimitri A Svistunenko; Michael T Wilson; Andrew M Hemmings; Geoffrey R Moore; Nick E Le Brun
Journal:  J Biol Chem       Date:  2020-10-12       Impact factor: 5.157

8.  IdeR, a DtxR Family Iron Response Regulator, Controls Iron Homeostasis, Morphological Differentiation, Secondary Metabolism, and the Oxidative Stress Response in Streptomyces avermitilis.

Authors:  Yaqing Cheng; Renjun Yang; Mengya Lyu; Shiwei Wang; Xingchao Liu; Ying Wen; Yuan Song; Jilun Li; Zhi Chen
Journal:  Appl Environ Microbiol       Date:  2018-10-30       Impact factor: 4.792

9.  Roles of the A and C sites in the manganese-specific activation of MntR.

Authors:  Amanda M McGuire; Bonnie J Cuthbert; Zhen Ma; Kristen D Grauer-Gray; Megan Brunjes Brophy; Kayce A Spear; Sumarin Soonsanga; Joseph I Kliegman; Sarah L Griner; John D Helmann; Arthur Glasfeld
Journal:  Biochemistry       Date:  2013-01-17       Impact factor: 3.162

10.  Mechanism of metal ion activation of the diphtheria toxin repressor DtxR.

Authors:  J Alejandro D'Aquino; Jaclyn Tetenbaum-Novatt; Andre White; Fred Berkovitch; Dagmar Ringe
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-13       Impact factor: 11.205

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