Literature DB >> 21511390

Metalloregulatory proteins: metal selectivity and allosteric switching.

Hermes Reyes-Caballero1, Gregory C Campanello, David P Giedroc.   

Abstract

Prokaryotic organisms have evolved the capacity to quickly adapt to a changing and challenging microenvironment in which the availability of both biologically required and non-essential transition metal ions can vary dramatically. In all bacteria, a panel of metalloregulatory proteins controls the expression of genes encoding membrane transporters and metal trafficking proteins that collectively manage metal homeostasis and resistance. These "metal sensors" are specialized allosteric proteins, in which the direct binding of a specific or small number of "cognate" metal ion(s) drives a conformational change in the regulator that allosterically activates or inhibits operator DNA binding, or alternatively, distorts the promoter structure thereby converting a poor promoter to a strong one. In this review, we discuss our current understanding of the features that control metal specificity of the allosteric response in these systems, and the role that structure, thermodynamics and conformational dynamics play in mediating allosteric activation or inhibition of DNA binding.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21511390      PMCID: PMC3097251          DOI: 10.1016/j.bpc.2011.03.010

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  134 in total

1.  A nickel-cobalt-sensing ArsR-SmtB family repressor. Contributions of cytosol and effector binding sites to metal selectivity.

Authors:  Jennifer S Cavet; Wenmao Meng; Mario A Pennella; Rebecca J Appelhoff; David P Giedroc; Nigel J Robinson
Journal:  J Biol Chem       Date:  2002-08-05       Impact factor: 5.157

Review 2.  Regulatory circuits in Helicobacter pylori : network motifs and regulators involved in metal-dependent responses.

Authors:  Alberto Danielli; Vincenzo Scarlato
Journal:  FEMS Microbiol Rev       Date:  2010-05-19       Impact factor: 16.408

3.  Resistance to hydrogen peroxide in Helicobacter pylori: role of catalase (KatA) and Fur, and functional analysis of a novel gene product designated 'KatA-associated protein', KapA (HP0874).

Authors:  Andrew G Harris; Francis E Hinds; Anthony G Beckhouse; Tassia Kolesnikow; Stuart L Hazell
Journal:  Microbiology       Date:  2002-12       Impact factor: 2.777

4.  Crystal structure and function of the zinc uptake regulator FurB from Mycobacterium tuberculosis.

Authors:  Debora Lucarelli; Santina Russo; Elspeth Garman; Anna Milano; Wolfram Meyer-Klaucke; Ehmke Pohl
Journal:  J Biol Chem       Date:  2007-01-09       Impact factor: 5.157

5.  DR2539 is a novel DtxR-like regulator of Mn/Fe ion homeostasis and antioxidant enzyme in Deinococcus radiodurans.

Authors:  Huan Chen; Rongrong Wu; Guangzhi Xu; Xu Fang; Xiaoli Qiu; Hongyin Guo; Bing Tian; Yuejin Hua
Journal:  Biochem Biophys Res Commun       Date:  2010-04-22       Impact factor: 3.575

6.  Structure of the manganese-bound manganese transport regulator of Bacillus subtilis.

Authors:  Arthur Glasfeld; Emmanuel Guedon; John D Helmann; Richard G Brennan
Journal:  Nat Struct Biol       Date:  2003-08

7.  Protein dynamics and monomer-monomer interactions in AntR activation by electron paramagnetic resonance and double electron-electron resonance.

Authors:  K Ilker Sen; Timothy M Logan; Piotr G Fajer
Journal:  Biochemistry       Date:  2007-09-19       Impact factor: 3.162

8.  Elucidation of primary (alpha(3)N) and vestigial (alpha(5)) heavy metal-binding sites in Staphylococcus aureus pI258 CadC: evolutionary implications for metal ion selectivity of ArsR/SmtB metal sensor proteins.

Authors:  Laura S Busenlehner; Tsu-Chien Weng; James E Penner-Hahn; David P Giedroc
Journal:  J Mol Biol       Date:  2002-06-07       Impact factor: 5.469

9.  Ni(II) and Co(II) sensing by Escherichia coli RcnR.

Authors:  Jeffrey S Iwig; Sharon Leitch; Robert W Herbst; Michael J Maroney; Peter T Chivers
Journal:  J Am Chem Soc       Date:  2008-05-28       Impact factor: 15.419

10.  Nur, a nickel-responsive regulator of the Fur family, regulates superoxide dismutases and nickel transport in Streptomyces coelicolor.

Authors:  Bo-Eun Ahn; Joonseok Cha; Eun-Jin Lee; Ah-Reum Han; Charles J Thompson; Jung-Hye Roe
Journal:  Mol Microbiol       Date:  2006-03       Impact factor: 3.501

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  67 in total

1.  Copper-zinc cross-modulation in prion protein binding.

Authors:  Francesco Stellato; Velia Minicozzi; Glenn L Millhauser; Marco Pascucci; Olivier Proux; Giancarlo C Rossi; Ann Spevacek; Silvia Morante
Journal:  Eur Biophys J       Date:  2014-11-14       Impact factor: 1.733

2.  Crystallization and preliminary X-ray diffraction analysis of the metalloregulatory protein DtxR from Thermoplasma acidophilum.

Authors:  Hyun Ku Yeo; Jina Kang; Young Woo Park; Jung-Suk Sung; Jae Young Lee
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-01-26

3.  The X-ray absorption spectroscopic model of the copper(II) imidazole complex ion in liquid aqueous solution: a strongly solvated square pyramid.

Authors:  Patrick Frank; Maurizio Benfatto; Britt Hedman; Keith O Hodgson
Journal:  Inorg Chem       Date:  2012-02-08       Impact factor: 5.165

4.  O2 availability impacts iron homeostasis in Escherichia coli.

Authors:  Nicole A Beauchene; Erin L Mettert; Laura J Moore; Sündüz Keleş; Emily R Willey; Patricia J Kiley
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-30       Impact factor: 11.205

5.  Density functional tight binding: values of semi-empirical methods in an ab initio era.

Authors:  Qiang Cui; Marcus Elstner
Journal:  Phys Chem Chem Phys       Date:  2014-07-28       Impact factor: 3.676

6.  Mycobacterium tuberculosis NmtR harbors a nickel sensing site with parallels to Escherichia coli RcnR.

Authors:  Hermes Reyes-Caballero; Chul Won Lee; David P Giedroc
Journal:  Biochemistry       Date:  2011-08-26       Impact factor: 3.162

7.  Transcriptional regulatory proteins as biosensing tools.

Authors:  Kendrick Turner; Smita Joel; Jessika Feliciano; Agatha Feltus; Patrizia Pasini; Daniel Wynn; Peter Dau; Emre Dikici; Sapna K Deo; Sylvia Daunert
Journal:  Chem Commun (Camb)       Date:  2017-06-22       Impact factor: 6.222

8.  The Irving-Williams series and the 2-His-1-carboxylate facial triad: a thermodynamic study of Mn2+, Fe2+, and Co2+ binding to taurine/α-ketoglutarate dioxygenase (TauD).

Authors:  Mingjie Li; Kate L Henderson; Salette Martinez; Robert P Hausinger; Joseph P Emerson
Journal:  J Biol Inorg Chem       Date:  2018-06-19       Impact factor: 3.358

9.  Metal-induced sensor mobilization turns on affinity to activate regulator for metal detoxification in live bacteria.

Authors:  Bing Fu; Kushal Sengupta; Lauren A Genova; Ace George Santiago; Won Jung; Łukasz Krzemiński; Udit Kumar Chakraborty; Wenyao Zhang; Peng Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-28       Impact factor: 11.205

Review 10.  Recent developments in copper and zinc homeostasis in bacterial pathogens.

Authors:  Joseph J Braymer; David P Giedroc
Journal:  Curr Opin Chem Biol       Date:  2014-01-22       Impact factor: 8.822

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