Literature DB >> 12653993

'Antifreeze' glycoproteins from polar fish.

Margaret M Harding1, Pia I Anderberg, A D J Haymet.   

Abstract

Antifreeze glycoproteins (AFGPs) constitute the major fraction of protein in the blood serum of Antarctic notothenioids and Arctic cod. Each AFGP consists of a varying number of repeating units of (Ala-Ala-Thr)n, with minor sequence variations, and the disaccharide beta-D-galactosyl-(1-->3)-alpha-N-acetyl-D-galactosamine joined as a glycoside to the hydroxyl oxygen of the Thr residues. These compounds allow the fish to survive in subzero ice-laden polar oceans by kinetically depressing the temperature at which ice grows in a noncolligative manner. In contrast to the more widely studied antifreeze proteins, little is known about the mechanism of ice growth inhibition by AFGPs, and there is no definitive model that explains their properties. This review summarizes the structural and physical properties of AFGPs and advances in the last decade that now provide opportunities for further research in this field. High field NMR spectroscopy and molecular dynamics studies have shown that AFGPs are largely unstructured in aqueous solution. While standard carbohydrate degradation studies confirm the requirement of some of the sugar hydroxyls for antifreeze activity, the importance of following structural elements has not been established: (a) the number of hydroxyls required, (b) the stereochemistry of the sugar hydroxyls (i.e. the requirement of galactose as the sugar), (c) the acetamido group on the first galactose sugar, (d) the stereochemistry of the beta-glycosidic linkage between the two sugars and the alpha-glycosidic linkage to Thr, (e) the requirement of a disaccharide for activity, and (f) the Ala and Thr residues in the polypeptide backbone. The recent successful synthesis of small AFGPs using solution methods and solid-phase chemistry provides the opportunity to perform key structure-activity studies that would clarify the important residues and functional groups required for activity. Genetic studies have shown that the AFGPs present in the two geographically and phylogenetically distinct Antarctic notothenioids and Arctic cod have evolved independently, in a rare example of convergent molecular evolution. The AFGPs exhibit concentration dependent thermal hysteresis with maximum hysteresis (1.2 degrees C at 40 mg x mL-1) observed with the higher molecular mass glycoproteins. The ability to modify the rate and shape of crystal growth and protect cellular membranes during lipid-phase transitions have resulted in identification of a number of potential applications of AFGPs as food additives, and in the cryopreservation and hypothermal storage of cells and tissues.

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Year:  2003        PMID: 12653993     DOI: 10.1046/j.1432-1033.2003.03488.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  45 in total

Review 1.  Protein-solvent interactions.

Authors:  Ninad Prabhu; Kim Sharp
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

2.  A solid-state NMR study of the interaction of fish antifreeze proteins with phospholipid membranes.

Authors:  James Garner; Steven R Inglis; James Hook; Frances Separovic; Margaret M Harding
Journal:  Eur Biophys J       Date:  2008-05-01       Impact factor: 1.733

3.  Use of Ice Recrystallization Inhibition Assays to Screen for Compounds That Inhibit Ice Recrystallization.

Authors:  Anna A Ampaw; August Sibthorpe; Robert N Ben
Journal:  Methods Mol Biol       Date:  2021

4.  Characterization of type IV antifreeze gene in Nile tilapia (Oreochromis niloticus) and influence of cold and hot weather on its expression and some immune-related genes.

Authors:  Asmma Y Ammar; Abeer F El Nahas; Shawky Mahmoud; Mohamed E Barakat; Asmaa M Hassan
Journal:  Fish Physiol Biochem       Date:  2017-12-12       Impact factor: 2.794

5.  Anaplasma phagocytophilum induces Ixodes scapularis ticks to express an antifreeze glycoprotein gene that enhances their survival in the cold.

Authors:  Girish Neelakanta; Hameeda Sultana; Durland Fish; John F Anderson; Erol Fikrig
Journal:  J Clin Invest       Date:  2010-08-25       Impact factor: 14.808

6.  Hydrogen bonds in galactopyranoside and glucopyranoside: a density functional theory study.

Authors:  Zahrabatoul Mosapour Kotena; Reza Behjatmanesh-Ardakani; Rauzah Hashim; Vijayan Manickam Achari
Journal:  J Mol Model       Date:  2012-09-13       Impact factor: 1.810

7.  Influence of solvent and intramolecular hydrogen bonding on the conformational properties of o-linked glycopeptides.

Authors:  Sairam S Mallajosyula; Alexander D MacKerell
Journal:  J Phys Chem B       Date:  2011-08-31       Impact factor: 2.991

8.  Blood lipids in Antarctic and in temperate-water fish species.

Authors:  Carlo Alberto Palmerini; Michela Mazzoni; Giancarlo Giovinazzo; Giuseppe Arienti
Journal:  J Membr Biol       Date:  2009-08-21       Impact factor: 1.843

9.  X-ray diffraction to probe the kinetics of ice recrystallization inhibition.

Authors:  Alice Fayter; Steven Huband; Matthew I Gibson
Journal:  Analyst       Date:  2020-05-18       Impact factor: 4.616

10.  Effects of polyhydroxy compounds on beetle antifreeze protein activity.

Authors:  Natapol Amornwittawat; Sen Wang; Joseph Banatlao; Melody Chung; Efrain Velasco; John G Duman; Xin Wen
Journal:  Biochim Biophys Acta       Date:  2008-11-06
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