Literature DB >> 12622407

First evidence to show the topological change of DNA from B-dNA to Z-DNA conformation in the hippocampus of Alzheimer's brain.

Anitha Suram1, K S Jagannatha Rao, K S Latha, M A Viswamitra.   

Abstract

Alzheimer's disease (AD) is a complex neurodegenerative disorder. Our studies for the first time showed evidence for altered DNA conformation in the hippocampus of Alzheimer's disease affected brain. The Circular dichroism spectra of severely affected AD DNA showed a typical left-handed Z-DNA conformation, whereas normal, young, and aged brain DNA have the usual B-DNA conformation. Moderately affected AD DNA has modified B-DNA conformation (probable B-Z intermediate form). The ELISA, ethidium bromide binding pattern to DNA and melting temperature (Tm) profiles also revealed the conformational transition from B to Z DNA in AD brain DNA. The altered conformation of DNA will have tremendous implications in gene expressions.

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Year:  2002        PMID: 12622407     DOI: 10.1385/nmm:2:3:289

Source DB:  PubMed          Journal:  Neuromolecular Med        ISSN: 1535-1084            Impact factor:   4.103


  36 in total

1.  Topographic associations between DNA fragmentation and Alzheimer's disease neuropathology in the hippocampus.

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Journal:  Neurochem Int       Date:  1997-08       Impact factor: 3.921

2.  Mapping Z-DNA in the human genome. Computer-aided mapping reveals a nonrandom distribution of potential Z-DNA-forming sequences in human genes.

Authors:  G P Schroth; P J Chou; P S Ho
Journal:  J Biol Chem       Date:  1992-06-15       Impact factor: 5.157

3.  Assessment of amyloid beta-protein precursor gene mutations in a large set of familial and sporadic Alzheimer disease cases.

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Journal:  Am J Hum Genet       Date:  1992-08       Impact factor: 11.025

Review 4.  The biology of left-handed Z-DNA.

Authors:  A Herbert; A Rich
Journal:  J Biol Chem       Date:  1996-05-17       Impact factor: 5.157

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Journal:  Psychopharmacol Bull       Date:  1988

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Journal:  J Mol Biol       Date:  1987-08-05       Impact factor: 5.469

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Journal:  Science       Date:  1981-01-09       Impact factor: 47.728

8.  Ethidium binding to left-handed (Z) DNAs results in regions of right-handed DNA at the intercalation site.

Authors:  G T Walker; M P Stone; T R Krugh
Journal:  Biochemistry       Date:  1985-12-03       Impact factor: 3.162

9.  Fluorescence-detected circular dichroism of ethidium bound to poly(dG-dC) and poly(dG-m5dC) under B- and Z-form conditions.

Authors:  M L Lamos; G T Walker; T R Krugh; D H Turner
Journal:  Biochemistry       Date:  1986-02-11       Impact factor: 3.162

10.  Identification and DNA sequence of a human apolipoprotein E cDNA clone.

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  19 in total

1.  Time-dependent DNA condensation induced by amyloid beta-peptide.

Authors:  Haijia Yu; Jinsong Ren; Xiaogang Qu
Journal:  Biophys J       Date:  2006-10-06       Impact factor: 4.033

2.  The transition between the B and Z conformations of DNA investigated by targeted molecular dynamics simulations with explicit solvation.

Authors:  Mika A Kastenholz; Thomas U Schwartz; Philippe H Hünenberger
Journal:  Biophys J       Date:  2006-10-15       Impact factor: 4.033

Review 3.  Z-DNA in the genome: from structure to disease.

Authors:  Subramaniyam Ravichandran; Vinod Kumar Subramani; Kyeong Kyu Kim
Journal:  Biophys Rev       Date:  2019-05-22

Review 4.  Pathological implications of nucleic acid interactions with proteins associated with neurodegenerative diseases.

Authors:  Yraima Cordeiro; Bruno Macedo; Jerson L Silva; Mariana P B Gomes
Journal:  Biophys Rev       Date:  2014-01-09

5.  The Arabidopsis cell cycle checkpoint regulators TANMEI/ALT2 and ATR mediate the active process of aluminum-dependent root growth inhibition.

Authors:  Cynthia D Nezames; Caroline A Sjogren; Jesus F Barajas; Paul B Larsen
Journal:  Plant Cell       Date:  2012-02-17       Impact factor: 11.277

6.  Evidence of altered DNA integrity in the brain regions of suicidal victims of Bipolar Depression.

Authors:  Mohammed S Mustak; Muralidhar L Hegde; Athira Dinesh; Gabrielle B Britton; Ruben Berrocal; K Subba Rao; N M Shamasundar; K S J Rao; T S Sathyanarayana Rao
Journal:  Indian J Psychiatry       Date:  2010-07       Impact factor: 1.759

7.  New evidence on iron, copper accumulation and zinc depletion and its correlation with DNA integrity in aging human brain regions.

Authors:  P Vasudevaraju; Jyothsna T; N M Shamasundar; K Subba Rao; B M Balaraj; Rao Ksj; Sathyanarayana Rao T S
Journal:  Indian J Psychiatry       Date:  2010-04       Impact factor: 1.759

8.  Extracellular DNA facilitates the formation of functional amyloids in Staphylococcus aureus biofilms.

Authors:  Kelly Schwartz; Mahesh Ganesan; David E Payne; Michael J Solomon; Blaise R Boles
Journal:  Mol Microbiol       Date:  2015-10-14       Impact factor: 3.501

9.  First evidence for helical transitions in supercoiled DNA by amyloid Beta Peptide (1-42) and aluminum: a new insight in understanding Alzheimer's disease.

Authors:  Muralidhar L Hegde; Suram Anitha; Kallur S Latha; Mohammed S Mustak; Reuven Stein; Rivka Ravid; K S Jagannatha Rao
Journal:  J Mol Neurosci       Date:  2004       Impact factor: 3.444

10.  Drooping genes v/s dancing genes.

Authors:  T S Sathyanarayana Rao; K S Jagannatha Rao; M R Asha
Journal:  Indian J Psychiatry       Date:  2009 Jul-Sep       Impact factor: 1.759

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