Literature DB >> 12592012

Structural basis for sequential displacement of Ca(2+) by Yb(3+) in a protozoan EF-hand calcium binding protein.

Hanudatta S Atreya1, Sulakshana Mukherjee, Kandala V R Chary, Yong-Min Lee, Claudio Luchinat.   

Abstract

We have studied the displacement of Ca(2+)by the trivalent lanthanide ions (Yb(3+)) in a protozoan (Entamoeba histolytica) Ca(2+)-binding protein (EhCaBP), by NMR and thermodynamics. We have demonstrated, for the first time, how one can use in a combined fashion the utility of NMR and thermodynamics to have an insight to the relative binding specificities/affinity between Ca(2+) and Yb(3+). As revealed by the titration experiments, Yb(3+) displaces Ca(2+) from the four metal binding sites present in EhCaBP in a sequential manner. The study provides a structural origin for such a sequential Ca(2+) displacement by Yb(3+) in EhCaBP.

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Year:  2003        PMID: 12592012      PMCID: PMC2312449          DOI: 10.1110/ps.0225603

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  32 in total

1.  Site-site communication in the EF-hand Ca2+-binding protein calbindin D9k.

Authors:  L Mäler; J Blankenship; M Rance; W J Chazin
Journal:  Nat Struct Biol       Date:  2000-03

Review 2.  Classification and evolution of EF-hand proteins.

Authors:  H Kawasaki; S Nakayama; R H Kretsinger
Journal:  Biometals       Date:  1998-12       Impact factor: 2.949

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Authors:  S Linse; S Forsén
Journal:  Adv Second Messenger Phosphoprotein Res       Date:  1995

4.  Rapid measurement of binding constants and heats of binding using a new titration calorimeter.

Authors:  T Wiseman; S Williston; J F Brandts; L N Lin
Journal:  Anal Biochem       Date:  1989-05-15       Impact factor: 3.365

5.  Carp muscle calcium-binding protein. II. Structure determination and general description.

Authors:  R H Kretsinger; C E Nockolds
Journal:  J Biol Chem       Date:  1973-05-10       Impact factor: 5.157

6.  Structure/calcium affinity relationships of site III of calmodulin: testing the acid pair hypothesis using calmodulin mutants.

Authors:  X Wu; R E Reid
Journal:  Biochemistry       Date:  1997-07-15       Impact factor: 3.162

Review 7.  Molecular tuning of ion binding to calcium signaling proteins.

Authors:  J J Falke; S K Drake; A L Hazard; O B Peersen
Journal:  Q Rev Biophys       Date:  1994-08       Impact factor: 5.318

8.  Thermodynamics of metal ion binding and denaturation of a calcium binding protein from Entamoeba histolytica.

Authors:  B Gopal; C P Swaminathan; S Bhattacharya; A Bhattacharya; M R Murthy; A Surolia
Journal:  Biochemistry       Date:  1997-09-09       Impact factor: 3.162

9.  Structure and calcium-binding properties of Frq1, a novel calcium sensor in the yeast Saccharomyces cerevisiae.

Authors:  J B Ames; K B Hendricks; T Strahl; I G Huttner; N Hamasaki; J Thorner
Journal:  Biochemistry       Date:  2000-10-10       Impact factor: 3.162

10.  1H-NMR studies of synthetic peptide analogues of calcium-binding site III of rabbit skeletal troponin C: effect on the lanthanum affinity of the interchange of aspartic acid and asparagine residues at the metal ion coordinating positions.

Authors:  B J Marsden; R S Hodges; B D Sykes
Journal:  Biochemistry       Date:  1988-05-31       Impact factor: 3.162

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  4 in total

1.  Functional manipulation of a calcium-binding protein from Entamoeba histolytica guided by paramagnetic NMR.

Authors:  Ashok K Rout; Sunita Patel; Manish Shukla; Deepa Saraswathi; Alok Bhattacharya; Kandala V R Chary
Journal:  J Biol Chem       Date:  2013-06-19       Impact factor: 5.157

2.  Using lanthanide ions to align troponin complexes in solution: order of lanthanide occupancy in cardiac troponin C.

Authors:  Grant L Gay; Darrin A Lindhout; Brian D Sykes
Journal:  Protein Sci       Date:  2004-03       Impact factor: 6.725

3.  Biophysical Reviews' "Meet the Councilor Series"-a profile of Kandala V. R. Chary.

Authors:  Kandala V R Chary
Journal:  Biophys Rev       Date:  2021-12-08

Review 4.  Identification of C-terminal neighbours of amino acid residues without an aliphatic 13Cgamma as an aid to NMR assignments in proteins.

Authors:  Ravi Pratap Barnwal; Ashok K Rout; Hanudatta S Atreya; Kandala V R Chary
Journal:  J Biomol NMR       Date:  2008-07-17       Impact factor: 2.582

  4 in total

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