Literature DB >> 3415981

1H-NMR studies of synthetic peptide analogues of calcium-binding site III of rabbit skeletal troponin C: effect on the lanthanum affinity of the interchange of aspartic acid and asparagine residues at the metal ion coordinating positions.

B J Marsden1, R S Hodges, B D Sykes.   

Abstract

The present work determines the contribution of liganding aspartic acid (Asp) residues, at the +X, +Y, and +Z metal ion coordinating positions, to the lanthanum(3+) (La3+) ion binding affinity of synthetic analogues of calcium-binding site III of rabbit skeletal troponin C. Eight 13-residue synthetic analogues were prepared by solid-phase synthesis; the primary sequences of these analogues represent all possible combinations having aspartic acid and asparagine at the +X, +Y, and +Z positions. High-field proton nuclear magnetic resonance (NMR) spectroscopy was used to monitor the binding of the La3+ ion to each of the analogues. Comparison of the chemical shift changes showed large variations in the magnitude of the shift; these were reflected in the La3+ ion association constants determined for each analogue. The association constants ranged from 9.1 x 10(2) M-1 to 2.5 x 10(5) M-1. It was observed that those analogues with the larger number of acidic residues to coordinate the La3+ ion yielded the higher association constants. The La3+ ion binding results demonstrate that the Asp residues at the positions of study contribute equally and in an additive manner to the association constant and that the presence of neighboring Asp residues at either the +X and +Y, the +Y and +Z, or the +X and +Y and +Z metal ion coordinating positions introduced dentate-dentate repulsion, which, acts as to detract from the La3+ ion association constant of the analogues.

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Year:  1988        PMID: 3415981     DOI: 10.1021/bi00411a043

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Structural basis for sequential displacement of Ca(2+) by Yb(3+) in a protozoan EF-hand calcium binding protein.

Authors:  Hanudatta S Atreya; Sulakshana Mukherjee; Kandala V R Chary; Yong-Min Lee; Claudio Luchinat
Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

2.  Role of interchain alpha-helical hydrophobic interactions in Ca2+ affinity, formation, and stability of a two-site domain in troponin C.

Authors:  O D Monera; G S Shaw; B Y Zhu; B D Sykes; C M Kay; R S Hodges
Journal:  Protein Sci       Date:  1992-07       Impact factor: 6.725

3.  Determination of calcium binding sites in gas-phase small peptides by tandem mass spectrometry.

Authors:  O V Nemirovskiy; M L Gross
Journal:  J Am Soc Mass Spectrom       Date:  1998-10       Impact factor: 3.109

4.  15N nuclear magnetic resonance relaxation studies on rat beta-parvalbumin and the pentacarboxylate variants, S55D and G98D.

Authors:  Michael T Henzl; Wei G Wycoff; John D Larson; John J Likos
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

5.  Intrinsic Ca2+ affinities of peptides: application of the kinetic method to analogs of calcium-binding site III of rabbit skeletal troponin C.

Authors:  O V Nemirovskiy; M L Gross
Journal:  J Am Soc Mass Spectrom       Date:  2000-09       Impact factor: 3.109

6.  Calcium(II) site specificity: effect of size and charge on metal ion binding to an EF-hand-like site.

Authors:  E E Snyder; B W Buoscio; J J Falke
Journal:  Biochemistry       Date:  1990-04-24       Impact factor: 3.162

7.  Integration of Diverse Research Methods to Analyze and Engineer Ca-Binding Proteins: From Prediction to Production.

Authors:  Michael Kirberger; Xue Wang; Kun Zhao; Shen Tang; Guantao Chen; Jenny J Yang
Journal:  Curr Bioinform       Date:  2010-03-01       Impact factor: 3.543

  7 in total

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